Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.82■□□□□ 0.92
SPTLC1O15269 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.82■□□□□ 0.92
SPTLC1O15269 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.82■□□□□ 0.92
SPTLC1O15269 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.82■□□□□ 0.92
SPTLC1O15269 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.82■□□□□ 0.92
SPTLC1O15269 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 AC008040.2-201ENST00000461049 708 ntBASIC20.82■□□□□ 0.92
SPTLC1O15269 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.82■□□□□ 0.92
SPTLC1O15269 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.82■□□□□ 0.92
SPTLC1O15269 MIR6786-201ENST00000616843 113 ntBASIC20.82■□□□□ 0.92
SPTLC1O15269 AC131212.4-201ENST00000623606 975 ntBASIC20.82■□□□□ 0.92
SPTLC1O15269 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
SPTLC1O15269 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC1O15269 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SPTLC1O15269 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SPTLC1O15269 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 TMPOP1-202ENST00000424642 1267 ntBASIC20.81■□□□□ 0.92
SPTLC1O15269 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.81■□□□□ 0.92
SPTLC1O15269 Z85996.1-201ENST00000494644 937 ntBASIC20.81■□□□□ 0.92
SPTLC1O15269 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC1O15269 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC1O15269 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC1O15269 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC1O15269 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC1O15269 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC1O15269 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPTLC1O15269 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SPTLC1O15269 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SPTLC1O15269 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 AL390955.1-201ENST00000428694 934 ntBASIC20.8■□□□□ 0.92
SPTLC1O15269 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.8■□□□□ 0.92
SPTLC1O15269 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SPTLC1O15269 AC125437.2-201ENST00000625180 2167 ntBASIC20.8■□□□□ 0.92
SPTLC1O15269 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SPTLC1O15269 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.8■□□□□ 0.92
SPTLC1O15269 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC1O15269 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC1O15269 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.79■□□□□ 0.92
SPTLC1O15269 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.79■□□□□ 0.92
SPTLC1O15269 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.79■□□□□ 0.92
SPTLC1O15269 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SPTLC1O15269 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SPTLC1O15269 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 UNC93B2-201ENST00000285383 730 ntBASIC20.79■□□□□ 0.92
SPTLC1O15269 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SPTLC1O15269 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 KRT18P35-201ENST00000510488 1269 ntBASIC20.79■□□□□ 0.92
SPTLC1O15269 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.79■□□□□ 0.92
SPTLC1O15269 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.79■□□□□ 0.92
SPTLC1O15269 FSCN1P1-201ENST00000568912 1481 ntBASIC20.79■□□□□ 0.92
SPTLC1O15269 RCC2P6-201ENST00000526625 1557 ntBASIC20.79■□□□□ 0.92
SPTLC1O15269 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
SPTLC1O15269 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SPTLC1O15269 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC1O15269 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTLC1O15269 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
SPTLC1O15269 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms