Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
VGFO15240 AL671277.2-201ENST00000458060 996 ntBASIC27.54■■■□□ 2
VGFO15240 AL359075.1-203ENST00000462729 1002 ntBASIC27.54■■■□□ 2
VGFO15240 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC27.54■■■□□ 2
VGFO15240 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC27.54■■■□□ 2
VGFO15240 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
VGFO15240 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC27.54■■■□□ 2
VGFO15240 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC27.54■■■□□ 2
VGFO15240 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC27.54■■■□□ 2
VGFO15240 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC27.54■■■□□ 2
VGFO15240 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
VGFO15240 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
VGFO15240 ANKRD18DP-204ENST00000455355 1975 ntBASIC27.53■■■□□ 2
VGFO15240 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC27.53■■■□□ 2
VGFO15240 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
VGFO15240 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC27.53■■■□□ 2
VGFO15240 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
VGFO15240 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC27.53■■■□□ 2
VGFO15240 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC27.53■■■□□ 2
VGFO15240 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC27.53■■■□□ 2
VGFO15240 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC27.53■■■□□ 2
VGFO15240 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 AC073314.1-201ENST00000568729 2216 ntBASIC27.53■■■□□ 2
VGFO15240 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC27.53■■■□□ 2
VGFO15240 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
VGFO15240 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
VGFO15240 IER3-202ENST00000376377 1350 ntBASIC27.52■■■□□ 2
VGFO15240 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC27.52■■■□□ 2
VGFO15240 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC27.52■■■□□ 2
VGFO15240 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
VGFO15240 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC27.52■■■□□ 2
VGFO15240 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
VGFO15240 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC27.52■■■□□ 2
VGFO15240 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
VGFO15240 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC27.52■■■□□ 2
VGFO15240 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
VGFO15240 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
VGFO15240 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
VGFO15240 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
VGFO15240 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
VGFO15240 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC27.51■■□□□ 1.99
VGFO15240 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC27.51■■□□□ 1.99
VGFO15240 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
VGFO15240 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
VGFO15240 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
VGFO15240 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
VGFO15240 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
VGFO15240 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
VGFO15240 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC27.51■■□□□ 1.99
VGFO15240 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
VGFO15240 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC27.51■■□□□ 1.99
VGFO15240 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
VGFO15240 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
VGFO15240 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC27.5■■□□□ 1.99
VGFO15240 AL512408.1-201ENST00000569378 2000 ntBASIC27.5■■□□□ 1.99
VGFO15240 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
VGFO15240 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC27.5■■□□□ 1.99
VGFO15240 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
VGFO15240 AP000523.1-201ENST00000398242 1049 ntBASIC27.5■■□□□ 1.99
VGFO15240 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
VGFO15240 KRT18P38-201ENST00000449496 1282 ntBASIC27.5■■□□□ 1.99
VGFO15240 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
VGFO15240 KRT18P56-201ENST00000507275 550 ntBASIC27.5■■□□□ 1.99
VGFO15240 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC27.5■■□□□ 1.99
VGFO15240 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC27.5■■□□□ 1.99
VGFO15240 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC27.5■■□□□ 1.99
VGFO15240 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC27.5■■□□□ 1.99
VGFO15240 AC116407.4-201ENST00000623319 1061 ntBASIC27.5■■□□□ 1.99
VGFO15240 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
VGFO15240 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC27.5■■□□□ 1.99
VGFO15240 AL162377.1-201ENST00000618844 1793 ntBASIC27.5■■□□□ 1.99
VGFO15240 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC27.49■■□□□ 1.99
VGFO15240 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC27.49■■□□□ 1.99
VGFO15240 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 DAP-202ENST00000432074 1048 ntTSL 2 BASIC27.49■■□□□ 1.99
VGFO15240 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
VGFO15240 TOLLIP-AS1-201ENST00000530897 939 ntBASIC27.49■■□□□ 1.99
VGFO15240 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC27.49■■□□□ 1.99
VGFO15240 NEK4P2-201ENST00000580004 1012 ntBASIC27.49■■□□□ 1.99
VGFO15240 NT5C-210ENST00000582160 860 ntTSL 2 BASIC27.49■■□□□ 1.99
VGFO15240 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
VGFO15240 PALM-208ENST00000592155 2272 ntTSL 4 BASIC27.49■■□□□ 1.99
VGFO15240 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
VGFO15240 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC27.48■■□□□ 1.99
VGFO15240 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
VGFO15240 AC005332.1-201ENST00000577698 1310 ntBASIC27.48■■□□□ 1.99
VGFO15240 Telomerase-vert.1-201ENST00000363312 438 ntBASIC27.48■■□□□ 1.99
VGFO15240 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
VGFO15240 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms