Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH17O14917 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH17O14917 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH17O14917 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDH17O14917 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH17O14917 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.54■□□□□ 0.56
PCDH17O14917 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH17O14917 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH17O14917 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH17O14917 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH17O14917 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDH17O14917 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH17O14917 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH17O14917 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH17O14917 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH17O14917 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PCDH17O14917 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH17O14917 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH17O14917 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDH17O14917 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCDH17O14917 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH17O14917 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH17O14917 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDH17O14917 AL049637.2-201ENST00000641778 930 ntBASIC18.53■□□□□ 0.56
PCDH17O14917 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH17O14917 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PCDH17O14917 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH17O14917 TMEM179-206ENST00000616017 1645 ntBASIC18.52■□□□□ 0.56
PCDH17O14917 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH17O14917 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH17O14917 AC116351.2-201ENST00000606540 1585 ntBASIC18.52■□□□□ 0.56
PCDH17O14917 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDH17O14917 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH17O14917 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH17O14917 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH17O14917 AL353708.3-201ENST00000610272 989 ntBASIC18.52■□□□□ 0.56
PCDH17O14917 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDH17O14917 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDH17O14917 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH17O14917 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDH17O14917 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH17O14917 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 BX119927.1-201ENST00000636596 1552 ntBASIC18.51■□□□□ 0.55
PCDH17O14917 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 AC124283.5-201ENST00000624661 1809 ntBASIC18.51■□□□□ 0.55
PCDH17O14917 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH17O14917 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH17O14917 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH17O14917 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH17O14917 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH17O14917 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH17O14917 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDH17O14917 MIR4785-201ENST00000585005 73 ntBASIC18.51■□□□□ 0.55
PCDH17O14917 AC073912.3-201ENST00000624414 853 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms