Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.85■□□□□ 0.61
UBFD1O14562 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.85■□□□□ 0.61
UBFD1O14562 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.85■□□□□ 0.61
UBFD1O14562 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBFD1O14562 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
UBFD1O14562 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.84■□□□□ 0.61
UBFD1O14562 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.84■□□□□ 0.61
UBFD1O14562 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
UBFD1O14562 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.84■□□□□ 0.61
UBFD1O14562 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
UBFD1O14562 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.84■□□□□ 0.61
UBFD1O14562 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.84■□□□□ 0.61
UBFD1O14562 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UBFD1O14562 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.84■□□□□ 0.61
UBFD1O14562 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
UBFD1O14562 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
UBFD1O14562 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBFD1O14562 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBFD1O14562 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBFD1O14562 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
UBFD1O14562 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBFD1O14562 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
UBFD1O14562 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBFD1O14562 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.83■□□□□ 0.61
UBFD1O14562 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.83■□□□□ 0.61
UBFD1O14562 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBFD1O14562 FP475955.4-201ENST00000623131 1990 ntBASIC18.83■□□□□ 0.61
UBFD1O14562 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBFD1O14562 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.83■□□□□ 0.6
UBFD1O14562 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBFD1O14562 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
UBFD1O14562 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.83■□□□□ 0.6
UBFD1O14562 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.83■□□□□ 0.6
UBFD1O14562 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBFD1O14562 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UBFD1O14562 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.83■□□□□ 0.6
UBFD1O14562 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBFD1O14562 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UBFD1O14562 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.83■□□□□ 0.6
UBFD1O14562 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBFD1O14562 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBFD1O14562 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.82■□□□□ 0.6
UBFD1O14562 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBFD1O14562 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBFD1O14562 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
UBFD1O14562 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.82■□□□□ 0.6
UBFD1O14562 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.82■□□□□ 0.6
UBFD1O14562 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 AC006970.2-201ENST00000450065 779 ntBASIC18.82■□□□□ 0.6
UBFD1O14562 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.82■□□□□ 0.6
UBFD1O14562 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBFD1O14562 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.82■□□□□ 0.6
UBFD1O14562 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.82■□□□□ 0.6
UBFD1O14562 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.82■□□□□ 0.6
UBFD1O14562 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.82■□□□□ 0.6
UBFD1O14562 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.82■□□□□ 0.6
UBFD1O14562 MYC-209ENST00000641252 345 ntBASIC18.82■□□□□ 0.6
UBFD1O14562 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
UBFD1O14562 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBFD1O14562 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
UBFD1O14562 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBFD1O14562 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.81■□□□□ 0.6
UBFD1O14562 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
UBFD1O14562 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBFD1O14562 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBFD1O14562 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBFD1O14562 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.81■□□□□ 0.6
UBFD1O14562 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.81■□□□□ 0.6
UBFD1O14562 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBFD1O14562 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.81■□□□□ 0.6
UBFD1O14562 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms