Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC25.06■■□□□ 1.6
CHL1O00533 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.06■■□□□ 1.6
CHL1O00533 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHL1O00533 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC25.05■■□□□ 1.6
CHL1O00533 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC25.05■■□□□ 1.6
CHL1O00533 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHL1O00533 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHL1O00533 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.05■■□□□ 1.6
CHL1O00533 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.05■■□□□ 1.6
CHL1O00533 ECEL1P3-201ENST00000427961 737 ntBASIC25.05■■□□□ 1.6
CHL1O00533 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHL1O00533 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHL1O00533 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.04■■□□□ 1.6
CHL1O00533 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
CHL1O00533 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHL1O00533 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
CHL1O00533 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.04■■□□□ 1.6
CHL1O00533 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.04■■□□□ 1.6
CHL1O00533 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.04■■□□□ 1.6
CHL1O00533 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CHL1O00533 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.03■■□□□ 1.6
CHL1O00533 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.03■■□□□ 1.6
CHL1O00533 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.03■■□□□ 1.6
CHL1O00533 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.03■■□□□ 1.6
CHL1O00533 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.03■■□□□ 1.6
CHL1O00533 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.03■■□□□ 1.6
CHL1O00533 AC097488.1-201ENST00000507834 756 ntBASIC25.03■■□□□ 1.6
CHL1O00533 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.03■■□□□ 1.6
CHL1O00533 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.03■■□□□ 1.6
CHL1O00533 AC010947.1-201ENST00000623454 693 ntBASIC25.03■■□□□ 1.6
CHL1O00533 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 AC096733.2-201ENST00000609937 1394 ntBASIC25.03■■□□□ 1.6
CHL1O00533 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHL1O00533 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CHL1O00533 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
CHL1O00533 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.02■■□□□ 1.6
CHL1O00533 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.02■■□□□ 1.6
CHL1O00533 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHL1O00533 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHL1O00533 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.02■■□□□ 1.6
CHL1O00533 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.02■■□□□ 1.6
CHL1O00533 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHL1O00533 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHL1O00533 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHL1O00533 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHL1O00533 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHL1O00533 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHL1O00533 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHL1O00533 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
CHL1O00533 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.01■■□□□ 1.59
CHL1O00533 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHL1O00533 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CHL1O00533 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHL1O00533 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHL1O00533 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.01■■□□□ 1.59
CHL1O00533 FAM207BP-201ENST00000447172 505 ntBASIC25.01■■□□□ 1.59
CHL1O00533 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.01■■□□□ 1.59
CHL1O00533 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
CHL1O00533 AC133561.5-201ENST00000635547 218 ntBASIC25.01■■□□□ 1.59
CHL1O00533 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.01■■□□□ 1.59
CHL1O00533 SDHAP1-207ENST00000440850 2000 ntBASIC25.01■■□□□ 1.59
CHL1O00533 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
CHL1O00533 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25■■□□□ 1.59
CHL1O00533 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25■■□□□ 1.59
CHL1O00533 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25■■□□□ 1.59
CHL1O00533 GRAMD4P8-201ENST00000605465 1115 ntBASIC25■■□□□ 1.59
CHL1O00533 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
CHL1O00533 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CHL1O00533 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
CHL1O00533 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHL1O00533 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms