Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC1O00299 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC1O00299 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLIC1O00299 AL138781.2-201ENST00000617896 1843 ntBASIC18.3■□□□□ 0.52
CLIC1O00299 AL049812.1-201ENST00000432563 2267 ntBASIC18.3■□□□□ 0.52
CLIC1O00299 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC1O00299 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 CROCCP3-202ENST00000420820 1947 ntBASIC18.3■□□□□ 0.52
CLIC1O00299 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.3■□□□□ 0.52
CLIC1O00299 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLIC1O00299 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLIC1O00299 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLIC1O00299 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC1O00299 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC1O00299 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC1O00299 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLIC1O00299 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLIC1O00299 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC1O00299 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLIC1O00299 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CLIC1O00299 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.29■□□□□ 0.52
CLIC1O00299 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.29■□□□□ 0.52
CLIC1O00299 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.29■□□□□ 0.52
CLIC1O00299 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.29■□□□□ 0.52
CLIC1O00299 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CLIC1O00299 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLIC1O00299 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLIC1O00299 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.28■□□□□ 0.52
CLIC1O00299 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 CDCA4P2-201ENST00000441182 718 ntBASIC18.28■□□□□ 0.52
CLIC1O00299 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.28■□□□□ 0.52
CLIC1O00299 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.28■□□□□ 0.52
CLIC1O00299 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.28■□□□□ 0.52
CLIC1O00299 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 AC092437.1-201ENST00000624794 1048 ntBASIC18.28■□□□□ 0.52
CLIC1O00299 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.28■□□□□ 0.52
CLIC1O00299 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLIC1O00299 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLIC1O00299 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.28■□□□□ 0.52
CLIC1O00299 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.28■□□□□ 0.52
CLIC1O00299 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLIC1O00299 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.27■□□□□ 0.52
CLIC1O00299 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLIC1O00299 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms