Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 AC124283.5-201ENST00000624661 1809 ntBASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPSF4LA6NMK7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPSF4LA6NMK7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SLC29A4P1-201ENST00000398760 971 ntBASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 AC073210.2-201ENST00000430369 194 ntBASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 AC092118.2-201ENST00000613495 667 ntBASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 LINC01465-201ENST00000408887 1940 ntBASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPSF4LA6NMK7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 AC091874.3-201ENST00000512672 1195 ntBASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.89■□□□□ 0.45
CPSF4LA6NMK7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms