Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AC091305.1-201ENST00000479476 895 ntBASIC16.83■□□□□ 0.28
HMX3A6NHT5 AL031598.1-201ENST00000561511 1773 ntBASIC16.83■□□□□ 0.28
HMX3A6NHT5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.83■□□□□ 0.28
HMX3A6NHT5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
HMX3A6NHT5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMX3A6NHT5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMX3A6NHT5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMX3A6NHT5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HMX3A6NHT5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMX3A6NHT5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 AL139384.1-201ENST00000612143 3047 ntBASIC16.82■□□□□ 0.28
HMX3A6NHT5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMX3A6NHT5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.82■□□□□ 0.28
HMX3A6NHT5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMX3A6NHT5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMX3A6NHT5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 AL161938.1-201ENST00000569833 2180 ntBASIC16.8■□□□□ 0.28
HMX3A6NHT5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 MIR572-201ENST00000384983 95 ntBASIC16.8■□□□□ 0.28
HMX3A6NHT5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 SUDS3P1-201ENST00000505831 966 ntBASIC16.8■□□□□ 0.28
HMX3A6NHT5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms