Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 TMEM191A-211ENST00000637163 1067 ntBASIC18.49■□□□□ 0.55
LRIT2A6NDA9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIT2A6NDA9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LRIT2A6NDA9 AC104417.2-201ENST00000562989 1793 ntBASIC18.47■□□□□ 0.55
LRIT2A6NDA9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AC005332.7-201ENST00000614046 2005 ntBASIC18.47■□□□□ 0.55
LRIT2A6NDA9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AL158047.1-201ENST00000445918 881 ntBASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT2A6NDA9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 HLA-A-209ENST00000638375 975 ntBASIC18.46■□□□□ 0.55
LRIT2A6NDA9 HTR7P1-201ENST00000538670 1336 ntBASIC18.46■□□□□ 0.55
LRIT2A6NDA9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT2A6NDA9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT2A6NDA9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms