Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 AL355802.2-201ENST00000402069 882 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 POM121L13P-201ENST00000422362 380 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 TUBB8P6-201ENST00000436895 1288 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 KRT18P16-201ENST00000510337 1294 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 PRKY-204ENST00000533551 1019 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC138932.1-201ENST00000534164 6830 ntBASIC13.71□□□□□ -0.21
TRBV6-4A0A1B0GX49 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-4A0A1B0GX49 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-4A0A1B0GX49 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 HLA-L-209ENST00000420110 1011 ntBASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 UNC93B5-201ENST00000530315 699 ntBASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms