Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TMEM179-206ENST00000616017 1645 ntBASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MKRN4P-201ENST00000444706 1521 ntBASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NCF1B-203ENST00000435988 1254 ntBASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC083906.2-201ENST00000511578 360 ntBASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AL589743.5-201ENST00000616611 1050 ntBASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FER1L4-210ENST00000615531 5998 ntBASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CYP21A1P-202ENST00000354927 1481 ntBASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC087633.2-202ENST00000565166 1439 ntBASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC010980.2-201ENST00000587099 1412 ntBASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms