Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV26-1A0A087WT03 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 KRT16P6-202ENST00000425692 1426 ntBASIC14.02□□□□□ -0.16
TRAV26-1A0A087WT03 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 TSPY20P-201ENST00000450910 630 ntBASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 UNC93B4-201ENST00000505679 747 ntBASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV26-1A0A087WT03 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 AC026366.1-201ENST00000488803 879 ntBASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV26-1A0A087WT03 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TRAV26-1A0A087WT03 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV26-1A0A087WT03 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV26-1A0A087WT03 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14□□□□□ -0.17
TRAV26-1A0A087WT03 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV26-1A0A087WT03 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV26-1A0A087WT03 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms