Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CDRT1-208ENST00000630868 794 ntBASIC7.54□□□□□ -1.2
RCCD1A6NED2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RCCD1A6NED2 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RCCD1A6NED2 PABPC1P8-201ENST00000452851 2086 ntBASIC7.54□□□□□ -1.2
RCCD1A6NED2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.54□□□□□ -1.2
RCCD1A6NED2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RCCD1A6NED2 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RCCD1A6NED2 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RCCD1A6NED2 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 Y_RNA.5-201ENST00000362334 102 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 RNA5SP472-201ENST00000363868 119 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 RN7SKP271-201ENST00000410528 320 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 OR4F2P-201ENST00000424047 938 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC130472.1-201ENST00000427885 309 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 FABP7P2-201ENST00000429946 379 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AF228730.2-201ENST00000438784 848 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 HMGN3P1-201ENST00000453847 193 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC002075.1-201ENST00000457396 676 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 RPL23AP11-201ENST00000475260 469 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 RN7SL516P-201ENST00000496127 297 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC096754.1-201ENST00000508904 818 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 RNU6-273P-201ENST00000516937 96 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 HMGB1P41-201ENST00000520234 440 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 SNORA70D-201ENST00000578836 135 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AL592436.1-201ENST00000605135 558 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 AL513218.1-201ENST00000606527 391 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC022893.3-201ENST00000607665 437 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.53□□□□□ -1.2
RCCD1A6NED2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RCCD1A6NED2 XPOTP1-201ENST00000443317 2398 ntBASIC7.53□□□□□ -1.2
RCCD1A6NED2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.52□□□□□ -1.2
RCCD1A6NED2 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RCCD1A6NED2 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RCCD1A6NED2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RCCD1A6NED2 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RCCD1A6NED2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RCCD1A6NED2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 KPNA2P2-201ENST00000419546 1489 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 SNORA73B-201ENST00000363217 204 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 RNU6-984P-201ENST00000363236 109 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 RNU1-21P-201ENST00000363327 163 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 AL606923.1-201ENST00000406616 190 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 AC023141.1-201ENST00000419418 379 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 AC018865.2-201ENST00000423631 129 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 CHIAP3-201ENST00000423668 1133 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 DUTP4-201ENST00000424782 475 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 FABP5P14-201ENST00000437273 393 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 AL138799.3-201ENST00000438968 350 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 RPSAP49-201ENST00000445182 886 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.52□□□□□ -1.21
RCCD1A6NED2 RPSAP7-201ENST00000456871 885 ntBASIC7.52□□□□□ -1.21
RCCD1A6NED2 MIR2053-201ENST00000459295 91 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms