Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 MALAT1-202ENST00000534336 8708 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AL133268.1-201ENST00000405676 1401 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RAD17P2-201ENST00000451754 1977 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 NXPH1-205ENST00000602349 1953 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AL512329.1-201ENST00000404600 1592 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AC105114.1-201ENST00000624795 1862 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 MTCO1P25-201ENST00000414449 1799 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 GABPAP-201ENST00000419271 1356 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AC011447.6-201ENST00000623510 2598 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 MIR411-201ENST00000362239 96 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RNA5SP308-201ENST00000362532 115 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.106-201ENST00000363189 100 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-660P-201ENST00000364566 109 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-294P-201ENST00000364999 102 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.331-201ENST00000365267 102 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-573P-201ENST00000383938 106 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.463-201ENST00000384271 102 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 MIR152-201ENST00000385212 87 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AL590635.1-201ENST00000406314 586 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 MIR1266-201ENST00000408125 84 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 ATP5BP1-201ENST00000411980 1574 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 HMGB3P31-201ENST00000413333 595 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AL445183.3-201ENST00000414168 502 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RPS26P38-201ENST00000414476 348 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 HSPE1P1-201ENST00000421494 318 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 RPL7AP51-201ENST00000422016 760 ntBASIC2.38□□□□□ -2.03
KRTAP4-3Q9BYR4 ELOCP20-201ENST00000422460 345 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms