Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC055764.2-201ENST00000610089 670 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 MIR6729-201ENST00000618194 65 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 AC091905.4-201ENST00000623432 202 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 AP002799.1-201ENST00000623552 423 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 AC104820.1-201ENST00000624183 307 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.07□□□□□ -1.76
ATP1B3P54709 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.07□□□□□ -1.76
ATP1B3P54709 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.07□□□□□ -1.76
ATP1B3P54709 AL139254.3-201ENST00000641097 674 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.07□□□□□ -1.76
ATP1B3P54709 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.07□□□□□ -1.76
ATP1B3P54709 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.07□□□□□ -1.76
ATP1B3P54709 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATP1B3P54709 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ATP1B3P54709 AL049555.1-201ENST00000562834 1933 ntBASIC4.07□□□□□ -1.76
ATP1B3P54709 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ATP1B3P54709 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 EOGT-210ENST00000615922 1931 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 RNU4-39P-201ENST00000362455 127 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 RNA5SP305-201ENST00000362665 119 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 RNU4-4P-201ENST00000364588 130 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 RNU1-106P-201ENST00000384382 164 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 MIR765-201ENST00000390226 114 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 RNU4-74P-201ENST00000411280 161 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC105402.1-201ENST00000413336 545 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 CHEK2P3-201ENST00000416118 248 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 PDSS1P1-201ENST00000422953 1114 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 GTF2IP2-201ENST00000424290 697 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 RPS24P8-201ENST00000431490 402 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 AC093414.1-201ENST00000434712 514 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 HMGB1P5-202ENST00000451497 985 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 HMGB3P21-201ENST00000452483 547 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC107398.1-201ENST00000486904 505 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC025164.1-201ENST00000496249 478 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP1B3P54709 GAPDHP56-201ENST00000506031 988 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC006499.3-201ENST00000506077 748 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP1B3P54709 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.06□□□□□ -1.76
ATP1B3P54709 RNA5SP34-201ENST00000516887 130 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.06□□□□□ -1.76
ATP1B3P54709 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP1B3P54709 HNRNPCP4-201ENST00000571636 900 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 RN7SL802P-201ENST00000577858 299 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 MIR5699-201ENST00000578903 90 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.06□□□□□ -1.76
ATP1B3P54709 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP1B3P54709 OR7A19P-201ENST00000608051 733 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP1B3P54709 FAM27B-201ENST00000610601 213 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 MIR6826-201ENST00000617808 98 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 AC116563.2-201ENST00000624751 535 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 BMS1P21-201ENST00000634565 365 ntBASIC4.06□□□□□ -1.76
ATP1B3P54709 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ATP1B3P54709 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP1B3P54709 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.06□□□□□ -1.76
ATP1B3P54709 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.06□□□□□ -1.76
ATP1B3P54709 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATP1B3P54709 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATP1B3P54709 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATP1B3P54709 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATP1B3P54709 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATP1B3P54709 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATP1B3P54709 OR56B2P-201ENST00000317102 954 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 RN7SKP95-201ENST00000362860 303 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 SNORA51.1-201ENST00000363243 140 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 AL590762.2-201ENST00000395798 571 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 RPS24P12-201ENST00000402084 394 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 AL589647.1-201ENST00000402485 466 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATP1B3P54709 Z86062.1-201ENST00000406773 777 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.05□□□□□ -1.76
ATP1B3P54709 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.05□□□□□ -1.76
ATP1B3P54709 OR2X1P-201ENST00000421144 687 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 AL590623.1-201ENST00000427864 105 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 AC114878.1-201ENST00000441166 358 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 CEACAMP7-201ENST00000444105 496 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 EEF1B2P5-201ENST00000444820 548 ntBASIC4.05□□□□□ -1.76
ATP1B3P54709 RPS6P2-201ENST00000454208 705 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms