RNA–Protein interactions for RNA: ENST00000416118.1

CHEK2P3-201, Transcript of checkpoint kinase 2 pseudogene 3, humanhuman

BASIC

Gene CHEK2P3, Length 248 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2P3-201ENST00000416118 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
CHEK2P3-201ENST00000416118 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
CHEK2P3-201ENST00000416118 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
CHEK2P3-201ENST00000416118 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
CHEK2P3-201ENST00000416118 FOXD1Q16676 465 aa15.37■□□□□ 0.05
CHEK2P3-201ENST00000416118 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
CHEK2P3-201ENST00000416118 PPP6R1Q9UPN7 881 aa14.61□□□□□ -0.07
CHEK2P3-201ENST00000416118 ADRA2BP18089 450 aa14.56□□□□□ -0.08
CHEK2P3-201ENST00000416118 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
CHEK2P3-201ENST00000416118 MSH5O43196 834 aa14.26□□□□□ -0.13
CHEK2P3-201ENST00000416118 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
CHEK2P3-201ENST00000416118 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
CHEK2P3-201ENST00000416118 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
CHEK2P3-201ENST00000416118 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
CHEK2P3-201ENST00000416118 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
CHEK2P3-201ENST00000416118 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
CHEK2P3-201ENST00000416118 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
CHEK2P3-201ENST00000416118 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
CHEK2P3-201ENST00000416118 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
CHEK2P3-201ENST00000416118 KCNA4P22459 653 aa12.73□□□□□ -0.37
CHEK2P3-201ENST00000416118 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
CHEK2P3-201ENST00000416118 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
CHEK2P3-201ENST00000416118 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
CHEK2P3-201ENST00000416118 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
CHEK2P3-201ENST00000416118 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
CHEK2P3-201ENST00000416118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHEK2P3-201ENST00000416118 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
CHEK2P3-201ENST00000416118 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
CHEK2P3-201ENST00000416118 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
CHEK2P3-201ENST00000416118 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
CHEK2P3-201ENST00000416118 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
CHEK2P3-201ENST00000416118 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
CHEK2P3-201ENST00000416118 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
CHEK2P3-201ENST00000416118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
CHEK2P3-201ENST00000416118 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
CHEK2P3-201ENST00000416118 ZBTB22O15209 634 aa11.72□□□□□ -0.53
CHEK2P3-201ENST00000416118 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
CHEK2P3-201ENST00000416118 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
CHEK2P3-201ENST00000416118 APLP2Q06481 763 aa11.66□□□□□ -0.54
CHEK2P3-201ENST00000416118 CAPN15O75808 1086 aa11.62□□□□□ -0.55
CHEK2P3-201ENST00000416118 DSG3P32926 999 aa11.54□□□□□ -0.56
CHEK2P3-201ENST00000416118 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
CHEK2P3-201ENST00000416118 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
CHEK2P3-201ENST00000416118 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
CHEK2P3-201ENST00000416118 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
CHEK2P3-201ENST00000416118 ATXN8OSP0DMR3 200 aa11.43□□□□□ -0.58
CHEK2P3-201ENST00000416118 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
CHEK2P3-201ENST00000416118 ABCB7O75027 752 aa11.36□□□□□ -0.59
CHEK2P3-201ENST00000416118 POLA2Q14181 598 aa11.29□□□□□ -0.6
CHEK2P3-201ENST00000416118 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
CHEK2P3-201ENST00000416118 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
CHEK2P3-201ENST00000416118 FBLN2P98095 1184 aa10.95□□□□□ -0.66
CHEK2P3-201ENST00000416118 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
CHEK2P3-201ENST00000416118 ABCC9O60706 1549 aa10.94□□□□□ -0.66
CHEK2P3-201ENST00000416118 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
CHEK2P3-201ENST00000416118 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
CHEK2P3-201ENST00000416118 AKT1S1Q96B36 256 aa10.82□□□□□ -0.68
CHEK2P3-201ENST00000416118 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
CHEK2P3-201ENST00000416118 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
CHEK2P3-201ENST00000416118 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
CHEK2P3-201ENST00000416118 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
CHEK2P3-201ENST00000416118 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
CHEK2P3-201ENST00000416118 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
CHEK2P3-201ENST00000416118 CHRDL2Q6WN34 429 aa10.6□□□□□ -0.71
CHEK2P3-201ENST00000416118 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
CHEK2P3-201ENST00000416118 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
CHEK2P3-201ENST00000416118 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHEK2P3-201ENST00000416118 POTEHQ6S545 545 aa10.53□□□□□ -0.72
CHEK2P3-201ENST00000416118 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
CHEK2P3-201ENST00000416118 FXR2P51116 673 aaKnown RBP eCLIP10.45□□□□□ -0.74
CHEK2P3-201ENST00000416118 PROM2Q8N271 834 aa10.44□□□□□ -0.74
CHEK2P3-201ENST00000416118 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
CHEK2P3-201ENST00000416118 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
CHEK2P3-201ENST00000416118 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
CHEK2P3-201ENST00000416118 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
CHEK2P3-201ENST00000416118 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
CHEK2P3-201ENST00000416118 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
CHEK2P3-201ENST00000416118 FKBP8Q14318 412 aa10.34□□□□□ -0.75
CHEK2P3-201ENST00000416118 NACADO15069 1562 aa10.34□□□□□ -0.75
CHEK2P3-201ENST00000416118 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
CHEK2P3-201ENST00000416118 CHADLQ6NUI6 762 aa10.23□□□□□ -0.77
CHEK2P3-201ENST00000416118 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
CHEK2P3-201ENST00000416118 ZCCHC6Q5VYS8 1495 aaKnown RBP10.2□□□□□ -0.78
CHEK2P3-201ENST00000416118 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
CHEK2P3-201ENST00000416118 FARP1Q9Y4F1 1045 aaPredicted RBP10.14□□□□□ -0.79
CHEK2P3-201ENST00000416118 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
CHEK2P3-201ENST00000416118 HAX1O00165 279 aa10.11□□□□□ -0.79
CHEK2P3-201ENST00000416118 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
CHEK2P3-201ENST00000416118 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
CHEK2P3-201ENST00000416118 BICRAQ9NZM4 1560 aa10.08□□□□□ -0.8
CHEK2P3-201ENST00000416118 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
CHEK2P3-201ENST00000416118 EVX2Q03828 476 aa10.05□□□□□ -0.8
CHEK2P3-201ENST00000416118 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
CHEK2P3-201ENST00000416118 MIER1Q8N108 512 aa10.02□□□□□ -0.81
CHEK2P3-201ENST00000416118 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
CHEK2P3-201ENST00000416118 SCRIBQ14160 1630 aa10.01□□□□□ -0.81
CHEK2P3-201ENST00000416118 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHEK2P3-201ENST00000416118 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
CHEK2P3-201ENST00000416118 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
CHEK2P3-201ENST00000416118 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms