Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC005868.1-201ENST00000536421 331 ntBASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC104695.2-201ENST00000605056 775 ntBASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AL392112.1-201ENST00000605115 829 ntBASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC007490.1-201ENST00000624321 703 ntBASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 CYP4F35P-202ENST00000636121 390 ntBASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-3A0A0A0MS03 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 NACA3P-201ENST00000359690 648 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 RNU1-77P-201ENST00000390868 162 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 RPS27AP11-201ENST00000402798 447 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 PTP4A1P1-201ENST00000420539 515 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 USP9YP26-201ENST00000421008 661 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 DPY19L1P2-201ENST00000426647 915 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 BX323845.1-201ENST00000432417 179 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 CYCSP12-201ENST00000437729 300 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 COX7BP2-201ENST00000437976 242 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC002542.1-201ENST00000440683 193 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC007327.1-201ENST00000447461 264 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC234781.3-201ENST00000452540 973 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC091180.1-201ENST00000462104 372 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 RPL23AP37-201ENST00000479658 549 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 RPS4XP20-201ENST00000505751 772 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC025260.1-201ENST00000548858 430 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC008015.1-201ENST00000555505 465 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC005951.1-201ENST00000576706 485 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AL392048.1-201ENST00000613946 534 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC090527.3-201ENST00000619041 548 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC022106.2-201ENST00000620114 757 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AP001962.1-201ENST00000624114 559 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC007671.2-201ENST00000637344 619 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC074101.1-201ENST00000637861 241 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC103706.2-201ENST00000638080 240 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC012078.1-201ENST00000405035 1646 ntBASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-3A0A0A0MS03 AC053481.2-202ENST00000582394 1500 ntBASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 ENSAP3-201ENST00000312710 333 ntBASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 RNU6-543P-201ENST00000362576 108 ntBASIC4.78□□□□□ -1.64
TRBV5-3A0A0A0MS03 RNU6-666P-201ENST00000363499 107 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms