RNA–Protein interactions for RNA: ENST00000550019.1

LINC02416-201, Transcript of long intergenic non-protein coding RNA 2416, humanhuman

TSL 4 BASIC

Gene LINC02416, Length 540 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02416-201ENST00000550019 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
LINC02416-201ENST00000550019 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
LINC02416-201ENST00000550019 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
LINC02416-201ENST00000550019 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
LINC02416-201ENST00000550019 FOXD1Q16676 465 aa18.98■□□□□ 0.63
LINC02416-201ENST00000550019 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
LINC02416-201ENST00000550019 MSH5O43196 834 aa17.87■□□□□ 0.45
LINC02416-201ENST00000550019 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
LINC02416-201ENST00000550019 ADRA2BP18089 450 aa17.74■□□□□ 0.43
LINC02416-201ENST00000550019 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LINC02416-201ENST00000550019 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
LINC02416-201ENST00000550019 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
LINC02416-201ENST00000550019 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
LINC02416-201ENST00000550019 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
LINC02416-201ENST00000550019 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
LINC02416-201ENST00000550019 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
LINC02416-201ENST00000550019 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
LINC02416-201ENST00000550019 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
LINC02416-201ENST00000550019 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
LINC02416-201ENST00000550019 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
LINC02416-201ENST00000550019 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
LINC02416-201ENST00000550019 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
LINC02416-201ENST00000550019 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
LINC02416-201ENST00000550019 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
LINC02416-201ENST00000550019 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
LINC02416-201ENST00000550019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
LINC02416-201ENST00000550019 KCNA4P22459 653 aa14.92□□□□□ -0.02
LINC02416-201ENST00000550019 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
LINC02416-201ENST00000550019 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
LINC02416-201ENST00000550019 CAPN15O75808 1086 aa14.4□□□□□ -0.1
LINC02416-201ENST00000550019 APLP2Q06481 763 aa14.39□□□□□ -0.11
LINC02416-201ENST00000550019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
LINC02416-201ENST00000550019 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
LINC02416-201ENST00000550019 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
LINC02416-201ENST00000550019 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
LINC02416-201ENST00000550019 DSG3P32926 999 aa14.22□□□□□ -0.13
LINC02416-201ENST00000550019 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
LINC02416-201ENST00000550019 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
LINC02416-201ENST00000550019 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
LINC02416-201ENST00000550019 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
LINC02416-201ENST00000550019 ABCB7O75027 752 aa14.02□□□□□ -0.17
LINC02416-201ENST00000550019 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
LINC02416-201ENST00000550019 POLA2Q14181 598 aa13.79□□□□□ -0.2
LINC02416-201ENST00000550019 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
LINC02416-201ENST00000550019 ZBTB22O15209 634 aa13.65□□□□□ -0.22
LINC02416-201ENST00000550019 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
LINC02416-201ENST00000550019 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
LINC02416-201ENST00000550019 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
LINC02416-201ENST00000550019 POTEHQ6S545 545 aa13.54□□□□□ -0.24
LINC02416-201ENST00000550019 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
LINC02416-201ENST00000550019 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
LINC02416-201ENST00000550019 FBLN2P98095 1184 aa13.31□□□□□ -0.28
LINC02416-201ENST00000550019 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
LINC02416-201ENST00000550019 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
LINC02416-201ENST00000550019 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
LINC02416-201ENST00000550019 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
LINC02416-201ENST00000550019 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
LINC02416-201ENST00000550019 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
LINC02416-201ENST00000550019 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
LINC02416-201ENST00000550019 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
LINC02416-201ENST00000550019 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
LINC02416-201ENST00000550019 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC02416-201ENST00000550019 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
LINC02416-201ENST00000550019 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC02416-201ENST00000550019 HAX1O00165 279 aa12.77□□□□□ -0.37
LINC02416-201ENST00000550019 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
LINC02416-201ENST00000550019 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
LINC02416-201ENST00000550019 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
LINC02416-201ENST00000550019 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
LINC02416-201ENST00000550019 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
LINC02416-201ENST00000550019 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
LINC02416-201ENST00000550019 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
LINC02416-201ENST00000550019 EVX2Q03828 476 aa12.46□□□□□ -0.41
LINC02416-201ENST00000550019 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
LINC02416-201ENST00000550019 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
LINC02416-201ENST00000550019 GABBR2O75899 941 aa12.29□□□□□ -0.44
LINC02416-201ENST00000550019 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
LINC02416-201ENST00000550019 CLCN6P51797 869 aa12.25□□□□□ -0.45
LINC02416-201ENST00000550019 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC02416-201ENST00000550019 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LINC02416-201ENST00000550019 PROM2Q8N271 834 aa12.18□□□□□ -0.46
LINC02416-201ENST00000550019 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
LINC02416-201ENST00000550019 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
LINC02416-201ENST00000550019 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
LINC02416-201ENST00000550019 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
LINC02416-201ENST00000550019 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
LINC02416-201ENST00000550019 MIER1Q8N108 512 aa12.02□□□□□ -0.49
LINC02416-201ENST00000550019 FKBP8Q14318 412 aa11.99□□□□□ -0.49
LINC02416-201ENST00000550019 LHX8Q68G74 356 aa11.96□□□□□ -0.49
LINC02416-201ENST00000550019 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
LINC02416-201ENST00000550019 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
LINC02416-201ENST00000550019 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
LINC02416-201ENST00000550019 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
LINC02416-201ENST00000550019 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
LINC02416-201ENST00000550019 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
LINC02416-201ENST00000550019 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms