RNA–Protein interactions for RNA: ENST00000377110.7

TRPM3-209, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRPM3, Length 12,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-209ENST00000377110 MYT1Q01538 1121 aa9.52□□□□□ -0.89
TRPM3-209ENST00000377110 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
TRPM3-209ENST00000377110 DCAF8L2P0C7V8 631 aa9.16□□□□□ -0.94
TRPM3-209ENST00000377110 NISCHQ9Y2I1 1504 aa8.99□□□□□ -0.97
TRPM3-209ENST00000377110 TTBK1Q5TCY1 1321 aaPredicted RBP8.92□□□□□ -0.98
TRPM3-209ENST00000377110 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
TRPM3-209ENST00000377110 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
TRPM3-209ENST00000377110 CENPBP07199 599 aaPredicted RBP8.78□□□□□ -1
TRPM3-209ENST00000377110 YTHDC1Q96MU7 727 aaKnown RBP8.66□□□□□ -1.02
TRPM3-209ENST00000377110 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
TRPM3-209ENST00000377110 FAM9AQ8IZU1 332 aaPredicted RBP8.53□□□□□ -1.04
TRPM3-209ENST00000377110 SUPT5HO00267 1087 aaKnown RBP8.53□□□□□ -1.04
TRPM3-209ENST00000377110 APLP2Q06481 763 aa8.52□□□□□ -1.05
TRPM3-209ENST00000377110 NEFLP07196 543 aa8.5□□□□□ -1.05
TRPM3-209ENST00000377110 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
TRPM3-209ENST00000377110 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
TRPM3-209ENST00000377110 SHROOM4Q9ULL8 1493 aa8.34□□□□□ -1.07
TRPM3-209ENST00000377110 DAXXQ9UER7 740 aaPredicted RBP8.33□□□□□ -1.08
TRPM3-209ENST00000377110 GLIPR1L2Q4G1C9 344 aa8.27□□□□□ -1.08
TRPM3-209ENST00000377110 EHMT2Q96KQ7 1210 aa8.25□□□□□ -1.09
TRPM3-209ENST00000377110 HRCP23327 699 aa8.16□□□□□ -1.1
TRPM3-209ENST00000377110 ZNF316A6NFI3 1004 aaPredicted RBP8.15□□□□□ -1.1
TRPM3-209ENST00000377110 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
TRPM3-209ENST00000377110 RANGAP1P46060 587 aaPredicted RBP8.1□□□□□ -1.11
TRPM3-209ENST00000377110 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
TRPM3-209ENST00000377110 TRIM26Q12899 539 aaPredicted RBP8.01□□□□□ -1.13
TRPM3-209ENST00000377110 TRIM41Q8WV44 630 aa7.98□□□□□ -1.13
TRPM3-209ENST00000377110 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
TRPM3-209ENST00000377110 ATP1B4Q9UN42 357 aaPredicted RBP7.96□□□□□ -1.14
TRPM3-209ENST00000377110 UBTFP17480 764 aaKnown RBP7.94□□□□□ -1.14
TRPM3-209ENST00000377110 CLSPNQ9HAW4 1339 aa7.92□□□□□ -1.14
TRPM3-209ENST00000377110 CDK11AQ9UQ88 783 aaPredicted RBP7.91□□□□□ -1.14
TRPM3-209ENST00000377110 ANP32AP39687 249 aaKnown RBP7.87□□□□□ -1.15
TRPM3-209ENST00000377110 DIEXFQ68CQ4 756 aaKnown RBP7.87□□□□□ -1.15
TRPM3-209ENST00000377110 ACIN1Q9UKV3 1341 aaKnown RBP7.85□□□□□ -1.15
TRPM3-209ENST00000377110 TNNT2P45379 298 aaPredicted RBP7.85□□□□□ -1.15
TRPM3-209ENST00000377110 BCL11AQ9H165 835 aa7.84□□□□□ -1.15
TRPM3-209ENST00000377110 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
TRPM3-209ENST00000377110 ANP32BQ92688 251 aaKnown RBP7.83□□□□□ -1.16
TRPM3-209ENST00000377110 BCANQ96GW7 911 aa7.83□□□□□ -1.16
TRPM3-209ENST00000377110 ABCC9O60706 1549 aa7.81□□□□□ -1.16
TRPM3-209ENST00000377110 POLR3GLQ9BT43 218 aa7.79□□□□□ -1.16
TRPM3-209ENST00000377110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.78□□□□□ -1.16
TRPM3-209ENST00000377110 HNRNPUL2Q1KMD3 747 aaKnown RBP7.78□□□□□ -1.16
TRPM3-209ENST00000377110 CDK11BP21127 795 aaKnown RBP7.76□□□□□ -1.17
TRPM3-209ENST00000377110 ZBTB47Q9UFB7 747 aaPredicted RBP7.76□□□□□ -1.17
TRPM3-209ENST00000377110 SLC24A1O60721 1099 aa7.75□□□□□ -1.17
TRPM3-209ENST00000377110 ANP32EQ9BTT0 268 aa7.74□□□□□ -1.17
TRPM3-209ENST00000377110 NCLP19338 710 aaKnown RBP7.72□□□□□ -1.17
TRPM3-209ENST00000377110 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
TRPM3-209ENST00000377110 ANP32CO43423 234 aa7.71□□□□□ -1.17
TRPM3-209ENST00000377110 NBR1Q14596 966 aa7.7□□□□□ -1.18
TRPM3-209ENST00000377110 CANXP27824 592 aaKnown RBP7.69□□□□□ -1.18
TRPM3-209ENST00000377110 TRIM44Q96DX7 344 aaPredicted RBP7.69□□□□□ -1.18
TRPM3-209ENST00000377110 PABPN1Q86U42 306 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRPM3-209ENST00000377110 ITGAEP38570 1179 aa7.66□□□□□ -1.18
TRPM3-209ENST00000377110 SCAF1Q9H7N4 1312 aaKnown RBP7.66□□□□□ -1.18
TRPM3-209ENST00000377110 NPM2Q86SE8 214 aaKnown RBP7.65□□□□□ -1.18
TRPM3-209ENST00000377110 SLC4A1APQ9BWU0 796 aaKnown RBP7.64□□□□□ -1.19
TRPM3-209ENST00000377110 ERICH6BQ5W0A0 696 aa7.64□□□□□ -1.19
TRPM3-209ENST00000377110 HSP90AA1P07900 732 aaKnown RBP7.63□□□□□ -1.19
TRPM3-209ENST00000377110 UPF2Q9HAU5 1272 aaKnown RBP7.62□□□□□ -1.19
TRPM3-209ENST00000377110 NAP1L5Q96NT1 182 aaPredicted RBP7.62□□□□□ -1.19
TRPM3-209ENST00000377110 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
TRPM3-209ENST00000377110 NEFMP07197 916 aa7.61□□□□□ -1.19
TRPM3-209ENST00000377110 CNGB1Q14028 1251 aaPredicted RBP7.59□□□□□ -1.19
TRPM3-209ENST00000377110 RB1CC1Q8TDY2 1594 aa7.54□□□□□ -1.2
TRPM3-209ENST00000377110 RTN4Q9NQC3 1192 aaKnown RBP7.54□□□□□ -1.2
TRPM3-209ENST00000377110 ARXQ96QS3 562 aa7.53□□□□□ -1.2
TRPM3-209ENST00000377110 CHIC1Q5VXU3 224 aa7.53□□□□□ -1.2
TRPM3-209ENST00000377110 FKBP8Q14318 412 aa7.52□□□□□ -1.21
TRPM3-209ENST00000377110 FBLN2P98095 1184 aa7.52□□□□□ -1.21
TRPM3-209ENST00000377110 DDRGK1Q96HY6 314 aa7.51□□□□□ -1.21
TRPM3-209ENST00000377110 NEUROD1Q13562 356 aa7.51□□□□□ -1.21
TRPM3-209ENST00000377110 SCRIBQ14160 1630 aa7.51□□□□□ -1.21
TRPM3-209ENST00000377110 AMER1Q5JTC6 1135 aaPredicted RBP7.5□□□□□ -1.21
TRPM3-209ENST00000377110 FAM50AQ14320 339 aaKnown RBP7.5□□□□□ -1.21
TRPM3-209ENST00000377110 PTMSP20962 102 aa7.49□□□□□ -1.21
TRPM3-209ENST00000377110 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
TRPM3-209ENST00000377110 BECN1Q14457 450 aa7.48□□□□□ -1.21
TRPM3-209ENST00000377110 DEKP35659 375 aaKnown RBP7.48□□□□□ -1.21
TRPM3-209ENST00000377110 TRIM52Q96A61 297 aa7.48□□□□□ -1.21
TRPM3-209ENST00000377110 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
TRPM3-209ENST00000377110 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
TRPM3-209ENST00000377110 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.47□□□□□ -1.21
TRPM3-209ENST00000377110 NPM1P06748 294 aaKnown RBP eCLIP7.46□□□□□ -1.21
TRPM3-209ENST00000377110 DCAF1Q9Y4B6 1507 aa7.46□□□□□ -1.21
TRPM3-209ENST00000377110 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
TRPM3-209ENST00000377110 GOLGA6L22H0YM25 854 aa7.46□□□□□ -1.22
TRPM3-209ENST00000377110 NACADO15069 1562 aa7.45□□□□□ -1.22
TRPM3-209ENST00000377110 CCDC136Q96JN2 1154 aa7.45□□□□□ -1.22
TRPM3-209ENST00000377110 PODXL2Q9NZ53 605 aa7.44□□□□□ -1.22
TRPM3-209ENST00000377110 PPM1GO15355 546 aaPredicted RBP7.44□□□□□ -1.22
TRPM3-209ENST00000377110 CALRP27797 417 aaKnown RBP7.44□□□□□ -1.22
TRPM3-209ENST00000377110 PTMAP06454 111 aaKnown RBP7.44□□□□□ -1.22
TRPM3-209ENST00000377110 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
TRPM3-209ENST00000377110 TNNT3P45378 269 aaPredicted RBP7.42□□□□□ -1.22
TRPM3-209ENST00000377110 PKNOX2Q96KN3 472 aa7.42□□□□□ -1.22
TRPM3-209ENST00000377110 DNTTIP2Q5QJE6 756 aaKnown RBP7.42□□□□□ -1.22
TRPM3-209ENST00000377110 RSPH6AQ9H0K4 717 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms