Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CXCL12P48061 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.43□□□□□ -1.7
CXCL12P48061 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.43□□□□□ -1.7
CXCL12P48061 CYCSP40-201ENST00000575927 294 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 AC053481.4-201ENST00000583164 216 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 RNU4-89P-201ENST00000607443 133 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 AC015804.1-201ENST00000622935 435 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CXCL12P48061 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL12P48061 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL12P48061 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 AC104260.2-201ENST00000623551 3497 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.43□□□□□ -1.7
CXCL12P48061 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL12P48061 MTCO1P46-201ENST00000451639 1491 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.43□□□□□ -1.7
CXCL12P48061 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL12P48061 SAMMSON-213ENST00000641336 1521 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 AL359922.3-201ENST00000624779 1670 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL12P48061 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL12P48061 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 RNA5SP372-201ENST00000390836 115 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL12P48061 AC108032.1-201ENST00000416706 207 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 EIF4HP2-201ENST00000424380 563 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 RRM2P4-201ENST00000441721 562 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 AC104651.2-201ENST00000447549 528 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 RN7SL691P-201ENST00000494487 301 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CXCL12P48061 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 KCTD9P2-201ENST00000512203 1013 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 NPM1P41-201ENST00000512920 831 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.42□□□□□ -1.7
CXCL12P48061 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL12P48061 AC009852.2-201ENST00000567898 485 ntBASIC4.42□□□□□ -1.7
CXCL12P48061 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.42□□□□□ -1.7
CXCL12P48061 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.42□□□□□ -1.7
CXCL12P48061 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL12P48061 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CXCL12P48061 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL12P48061 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CXCL12P48061 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL12P48061 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL12P48061 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL12P48061 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 AC008549.2-201ENST00000333482 706 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 MIR200C-201ENST00000384980 68 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL12P48061 AL080315.1-201ENST00000406055 466 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.41□□□□□ -1.7
CXCL12P48061 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL12P48061 AL512326.1-201ENST00000443050 721 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CXCL12P48061 AC091544.1-201ENST00000484702 348 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 AC146944.2-203ENST00000502493 354 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 AC139495.1-202ENST00000513164 354 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL12P48061 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 OR5BC1P-201ENST00000529327 739 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL12P48061 AL390334.1-201ENST00000556395 450 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL12P48061 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL12P48061 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL12P48061 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.41□□□□□ -1.7
CXCL12P48061 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.41□□□□□ -1.7
CXCL12P48061 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
CXCL12P48061 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CXCL12P48061 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.41□□□□□ -1.7
CXCL12P48061 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CXCL12P48061 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL12P48061 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.4□□□□□ -1.7
CXCL12P48061 AL355852.1-201ENST00000454081 1771 ntBASIC4.4□□□□□ -1.7
CXCL12P48061 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL12P48061 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL12P48061 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms