RNA–Protein interactions for RNA: ENST00000426358.1

LINC01400-201, Transcript of long intergenic non-protein coding RNA 1400, humanhuman

TSL 3 BASIC

Gene LINC01400, Length 947 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01400-201ENST00000426358 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
LINC01400-201ENST00000426358 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
LINC01400-201ENST00000426358 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
LINC01400-201ENST00000426358 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
LINC01400-201ENST00000426358 FOXD1Q16676 465 aa19.12■□□□□ 0.65
LINC01400-201ENST00000426358 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
LINC01400-201ENST00000426358 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
LINC01400-201ENST00000426358 ADRA2BP18089 450 aa18.13■□□□□ 0.49
LINC01400-201ENST00000426358 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
LINC01400-201ENST00000426358 MSH5O43196 834 aa17.75■□□□□ 0.43
LINC01400-201ENST00000426358 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
LINC01400-201ENST00000426358 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
LINC01400-201ENST00000426358 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
LINC01400-201ENST00000426358 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
LINC01400-201ENST00000426358 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
LINC01400-201ENST00000426358 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
LINC01400-201ENST00000426358 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
LINC01400-201ENST00000426358 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
LINC01400-201ENST00000426358 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
LINC01400-201ENST00000426358 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
LINC01400-201ENST00000426358 KCNA4P22459 653 aa15.71■□□□□ 0.11
LINC01400-201ENST00000426358 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
LINC01400-201ENST00000426358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC01400-201ENST00000426358 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
LINC01400-201ENST00000426358 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
LINC01400-201ENST00000426358 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
LINC01400-201ENST00000426358 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
LINC01400-201ENST00000426358 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
LINC01400-201ENST00000426358 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
LINC01400-201ENST00000426358 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
LINC01400-201ENST00000426358 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
LINC01400-201ENST00000426358 CAPN15O75808 1086 aa14.55□□□□□ -0.08
LINC01400-201ENST00000426358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
LINC01400-201ENST00000426358 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
LINC01400-201ENST00000426358 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
LINC01400-201ENST00000426358 MYCNP04198 464 aaPredicted RBP14.51□□□□□ -0.09
LINC01400-201ENST00000426358 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
LINC01400-201ENST00000426358 APLP2Q06481 763 aa14.46□□□□□ -0.09
LINC01400-201ENST00000426358 ZBTB22O15209 634 aa14.43□□□□□ -0.1
LINC01400-201ENST00000426358 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
LINC01400-201ENST00000426358 DSG3P32926 999 aa14.33□□□□□ -0.12
LINC01400-201ENST00000426358 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
LINC01400-201ENST00000426358 ABCB7O75027 752 aa14.25□□□□□ -0.13
LINC01400-201ENST00000426358 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
LINC01400-201ENST00000426358 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
LINC01400-201ENST00000426358 POLA2Q14181 598 aa14.07□□□□□ -0.16
LINC01400-201ENST00000426358 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
LINC01400-201ENST00000426358 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
LINC01400-201ENST00000426358 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
LINC01400-201ENST00000426358 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
LINC01400-201ENST00000426358 FBLN2P98095 1184 aa13.6□□□□□ -0.23
LINC01400-201ENST00000426358 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
LINC01400-201ENST00000426358 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
LINC01400-201ENST00000426358 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
LINC01400-201ENST00000426358 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
LINC01400-201ENST00000426358 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
LINC01400-201ENST00000426358 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
LINC01400-201ENST00000426358 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
LINC01400-201ENST00000426358 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
LINC01400-201ENST00000426358 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
LINC01400-201ENST00000426358 POTEHQ6S545 545 aa13.24□□□□□ -0.29
LINC01400-201ENST00000426358 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
LINC01400-201ENST00000426358 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
LINC01400-201ENST00000426358 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01400-201ENST00000426358 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
LINC01400-201ENST00000426358 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
LINC01400-201ENST00000426358 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
LINC01400-201ENST00000426358 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
LINC01400-201ENST00000426358 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC01400-201ENST00000426358 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
LINC01400-201ENST00000426358 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
LINC01400-201ENST00000426358 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
LINC01400-201ENST00000426358 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
LINC01400-201ENST00000426358 FKBP8Q14318 412 aa12.77□□□□□ -0.37
LINC01400-201ENST00000426358 HAX1O00165 279 aa12.73□□□□□ -0.37
LINC01400-201ENST00000426358 PROM2Q8N271 834 aa12.73□□□□□ -0.37
LINC01400-201ENST00000426358 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
LINC01400-201ENST00000426358 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
LINC01400-201ENST00000426358 EVX2Q03828 476 aa12.57□□□□□ -0.4
LINC01400-201ENST00000426358 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
LINC01400-201ENST00000426358 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
LINC01400-201ENST00000426358 MIER1Q8N108 512 aa12.48□□□□□ -0.41
LINC01400-201ENST00000426358 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
LINC01400-201ENST00000426358 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
LINC01400-201ENST00000426358 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
LINC01400-201ENST00000426358 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC01400-201ENST00000426358 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
LINC01400-201ENST00000426358 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
LINC01400-201ENST00000426358 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
LINC01400-201ENST00000426358 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
LINC01400-201ENST00000426358 GABBR2O75899 941 aa12.3□□□□□ -0.44
LINC01400-201ENST00000426358 TSPYL2Q9H2G4 693 aaPredicted RBP12.25□□□□□ -0.45
LINC01400-201ENST00000426358 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
LINC01400-201ENST00000426358 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
LINC01400-201ENST00000426358 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
LINC01400-201ENST00000426358 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
LINC01400-201ENST00000426358 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
LINC01400-201ENST00000426358 CLCN6P51797 869 aa12.16□□□□□ -0.46
LINC01400-201ENST00000426358 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
LINC01400-201ENST00000426358 NUBP1P53384 320 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms