Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC058791.1-201ENST00000608412 3198 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CRYBB2P1-203ENST00000415709 538 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 RPL21P43-201ENST00000425440 472 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC104978.1-201ENST00000449387 391 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC016550.3-201ENST00000515706 767 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC007991.1-201ENST00000522680 631 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC023762.1-201ENST00000603280 584 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC113403.1-201ENST00000604910 193 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 TMEM30CP-203ENST00000637814 1035 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 MIR183-201ENST00000384958 110 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC107982.3-201ENST00000584957 985 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 BPIFA4P-203ENST00000603168 689 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 OR4A15-201ENST00000314706 1035 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC114495.1-201ENST00000441274 436 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 Z95327.3-201ENST00000610385 572 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 MIR6891-201ENST00000618788 93 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 COX6B1P7-201ENST00000430845 235 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 ATP5G1P3-201ENST00000463301 410 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 RN7SL132P-201ENST00000478131 296 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC093014.1-201ENST00000548926 724 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 MIR5684-201ENST00000585074 65 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 MIR7-3-201ENST00000384898 110 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC068533.1-201ENST00000418542 415 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 PLGLA-201ENST00000465668 449 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 EEF1A1P25-201ENST00000495704 1267 ntBASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC2.97□□□□□ -1.93
ALMS1Q8TCU4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms