RNA–Protein interactions for RNA: ENST00000602847.1

AC004542.2-201, humanhuman

TSL 3 BASIC

Gene AC004542.2, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.2-201ENST00000602847 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
AC004542.2-201ENST00000602847 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
AC004542.2-201ENST00000602847 PHF23Q9BUL5 403 aaPredicted RBP16.01■□□□□ 0.15
AC004542.2-201ENST00000602847 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
AC004542.2-201ENST00000602847 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
AC004542.2-201ENST00000602847 FOXD1Q16676 465 aa14.59□□□□□ -0.07
AC004542.2-201ENST00000602847 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
AC004542.2-201ENST00000602847 ADRA2BP18089 450 aa14.05□□□□□ -0.16
AC004542.2-201ENST00000602847 PIAS4Q8N2W9 510 aaPredicted RBP13.67□□□□□ -0.22
AC004542.2-201ENST00000602847 MSH5O43196 834 aa13.66□□□□□ -0.22
AC004542.2-201ENST00000602847 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
AC004542.2-201ENST00000602847 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
AC004542.2-201ENST00000602847 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
AC004542.2-201ENST00000602847 KCNA4P22459 653 aa12.71□□□□□ -0.37
AC004542.2-201ENST00000602847 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
AC004542.2-201ENST00000602847 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
AC004542.2-201ENST00000602847 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
AC004542.2-201ENST00000602847 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
AC004542.2-201ENST00000602847 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
AC004542.2-201ENST00000602847 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
AC004542.2-201ENST00000602847 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
AC004542.2-201ENST00000602847 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
AC004542.2-201ENST00000602847 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
AC004542.2-201ENST00000602847 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
AC004542.2-201ENST00000602847 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
AC004542.2-201ENST00000602847 ZBTB22O15209 634 aa11.77□□□□□ -0.53
AC004542.2-201ENST00000602847 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
AC004542.2-201ENST00000602847 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
AC004542.2-201ENST00000602847 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
AC004542.2-201ENST00000602847 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
AC004542.2-201ENST00000602847 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
AC004542.2-201ENST00000602847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
AC004542.2-201ENST00000602847 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
AC004542.2-201ENST00000602847 C1QBPQ07021 282 aaKnown RBP11.48□□□□□ -0.57
AC004542.2-201ENST00000602847 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
AC004542.2-201ENST00000602847 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
AC004542.2-201ENST00000602847 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
AC004542.2-201ENST00000602847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.21□□□□□ -0.61
AC004542.2-201ENST00000602847 HNRNPUL2Q1KMD3 747 aaKnown RBP11.21□□□□□ -0.61
AC004542.2-201ENST00000602847 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
AC004542.2-201ENST00000602847 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
AC004542.2-201ENST00000602847 CAPN15O75808 1086 aa11.04□□□□□ -0.64
AC004542.2-201ENST00000602847 APLP2Q06481 763 aa11.03□□□□□ -0.64
AC004542.2-201ENST00000602847 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.65
AC004542.2-201ENST00000602847 ZNF219Q9P2Y4 722 aaPredicted RBP10.97□□□□□ -0.65
AC004542.2-201ENST00000602847 DSG3P32926 999 aa10.95□□□□□ -0.66
AC004542.2-201ENST00000602847 ABCB7O75027 752 aa10.9□□□□□ -0.66
AC004542.2-201ENST00000602847 POLA2Q14181 598 aa10.88□□□□□ -0.67
AC004542.2-201ENST00000602847 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
AC004542.2-201ENST00000602847 ZBTB12Q9Y330 459 aaPredicted RBP10.59□□□□□ -0.71
AC004542.2-201ENST00000602847 FBLN2P98095 1184 aa10.57□□□□□ -0.72
AC004542.2-201ENST00000602847 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
AC004542.2-201ENST00000602847 FKBP8Q14318 412 aa10.45□□□□□ -0.74
AC004542.2-201ENST00000602847 POTEHQ6S545 545 aa10.44□□□□□ -0.74
AC004542.2-201ENST00000602847 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
AC004542.2-201ENST00000602847 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
AC004542.2-201ENST00000602847 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
AC004542.2-201ENST00000602847 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
AC004542.2-201ENST00000602847 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
AC004542.2-201ENST00000602847 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
AC004542.2-201ENST00000602847 PROM2Q8N271 834 aa10.35□□□□□ -0.75
AC004542.2-201ENST00000602847 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
AC004542.2-201ENST00000602847 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
AC004542.2-201ENST00000602847 PABPN1Q86U42 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
AC004542.2-201ENST00000602847 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
AC004542.2-201ENST00000602847 CHRDL2Q6WN34 429 aa10.18□□□□□ -0.78
AC004542.2-201ENST00000602847 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
AC004542.2-201ENST00000602847 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
AC004542.2-201ENST00000602847 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
AC004542.2-201ENST00000602847 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
AC004542.2-201ENST00000602847 FBXO3Q9UK99 471 aa9.97□□□□□ -0.81
AC004542.2-201ENST00000602847 PIP4P2Q8N4L2 257 aa9.94□□□□□ -0.82
AC004542.2-201ENST00000602847 VASPP50552 380 aaPredicted RBP9.93□□□□□ -0.82
AC004542.2-201ENST00000602847 PRR29P0C7W0 189 aa9.9□□□□□ -0.82
AC004542.2-201ENST00000602847 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
AC004542.2-201ENST00000602847 CREBZFQ9NS37 354 aa9.9□□□□□ -0.82
AC004542.2-201ENST00000602847 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
AC004542.2-201ENST00000602847 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
AC004542.2-201ENST00000602847 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
AC004542.2-201ENST00000602847 MIER1Q8N108 512 aa9.83□□□□□ -0.84
AC004542.2-201ENST00000602847 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
AC004542.2-201ENST00000602847 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
AC004542.2-201ENST00000602847 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
AC004542.2-201ENST00000602847 HAX1O00165 279 aa9.77□□□□□ -0.85
AC004542.2-201ENST00000602847 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
AC004542.2-201ENST00000602847 NUBP1P53384 320 aa9.69□□□□□ -0.86
AC004542.2-201ENST00000602847 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
AC004542.2-201ENST00000602847 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
AC004542.2-201ENST00000602847 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
AC004542.2-201ENST00000602847 EVX2Q03828 476 aa9.63□□□□□ -0.87
AC004542.2-201ENST00000602847 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
AC004542.2-201ENST00000602847 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
AC004542.2-201ENST00000602847 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
AC004542.2-201ENST00000602847 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
AC004542.2-201ENST00000602847 C19orf67A6NJJ6 358 aa9.56□□□□□ -0.88
AC004542.2-201ENST00000602847 PKD2Q13563 968 aa9.56□□□□□ -0.88
AC004542.2-201ENST00000602847 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
AC004542.2-201ENST00000602847 TSPYL2Q9H2G4 693 aaPredicted RBP9.5□□□□□ -0.89
AC004542.2-201ENST00000602847 CD44P16070 742 aaKnown RBP9.49□□□□□ -0.89
AC004542.2-201ENST00000602847 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms