RNA–Protein interactions for RNA: ENST00000373220.7

CLSPN-203, Transcript of claspin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSPN, Length 3,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-203ENST00000373220 NISCHQ9Y2I1 1504 aa10.35□□□□□ -0.75
CLSPN-203ENST00000373220 CHIC1Q5VXU3 224 aa10.32□□□□□ -0.76
CLSPN-203ENST00000373220 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
CLSPN-203ENST00000373220 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
CLSPN-203ENST00000373220 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
CLSPN-203ENST00000373220 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.92
CLSPN-203ENST00000373220 ABCC9O60706 1549 aa9.2□□□□□ -0.94
CLSPN-203ENST00000373220 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
CLSPN-203ENST00000373220 CCDC180Q9P1Z9 1646 aa9.04□□□□□ -0.96
CLSPN-203ENST00000373220 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
CLSPN-203ENST00000373220 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
CLSPN-203ENST00000373220 DNAJC5BQ9UF47 199 aa8.93□□□□□ -0.98
CLSPN-203ENST00000373220 KCNA4P22459 653 aa8.92□□□□□ -0.98
CLSPN-203ENST00000373220 ZCCHC6Q5VYS8 1495 aaKnown RBP8.83□□□□□ -1
CLSPN-203ENST00000373220 CSRNP3Q8WYN3 585 aa8.79□□□□□ -1
CLSPN-203ENST00000373220 DCAF1Q9Y4B6 1507 aa8.73□□□□□ -1.01
CLSPN-203ENST00000373220 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
CLSPN-203ENST00000373220 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
CLSPN-203ENST00000373220 DCAF8L2P0C7V8 631 aa8.6□□□□□ -1.03
CLSPN-203ENST00000373220 RB1CC1Q8TDY2 1594 aa8.55□□□□□ -1.04
CLSPN-203ENST00000373220 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
CLSPN-203ENST00000373220 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
CLSPN-203ENST00000373220 ADRA2BP18089 450 aa8.51□□□□□ -1.05
CLSPN-203ENST00000373220 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
CLSPN-203ENST00000373220 MYO15BQ96JP2 1530 aa8.5□□□□□ -1.05
CLSPN-203ENST00000373220 SHROOM4Q9ULL8 1493 aa8.42□□□□□ -1.06
CLSPN-203ENST00000373220 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
CLSPN-203ENST00000373220 CECR2Q9BXF3 1484 aa8.41□□□□□ -1.06
CLSPN-203ENST00000373220 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
CLSPN-203ENST00000373220 NACADO15069 1562 aa8.3□□□□□ -1.08
CLSPN-203ENST00000373220 CUX2O14529 1486 aa8.3□□□□□ -1.08
CLSPN-203ENST00000373220 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
CLSPN-203ENST00000373220 ERCC6Q03468 1493 aa8.24□□□□□ -1.09
CLSPN-203ENST00000373220 HAP1P54257 671 aaPredicted RBP8.18□□□□□ -1.1
CLSPN-203ENST00000373220 EIF4G1Q04637 1599 aaKnown RBP8.17□□□□□ -1.1
CLSPN-203ENST00000373220 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
CLSPN-203ENST00000373220 CC2D2AQ9P2K1 1620 aa8.15□□□□□ -1.1
CLSPN-203ENST00000373220 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
CLSPN-203ENST00000373220 ZBTB22O15209 634 aa8.14□□□□□ -1.11
CLSPN-203ENST00000373220 SENP3Q9H4L4 574 aaPredicted RBP8.13□□□□□ -1.11
CLSPN-203ENST00000373220 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
CLSPN-203ENST00000373220 FKBP8Q14318 412 aa8.11□□□□□ -1.11
CLSPN-203ENST00000373220 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
CLSPN-203ENST00000373220 RSF1Q96T23 1441 aaPredicted RBP8.1□□□□□ -1.11
CLSPN-203ENST00000373220 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
CLSPN-203ENST00000373220 BCANQ96GW7 911 aa8.1□□□□□ -1.11
CLSPN-203ENST00000373220 SCRIBQ14160 1630 aa8.09□□□□□ -1.11
CLSPN-203ENST00000373220 UNC13AQ9UPW8 1703 aa8.08□□□□□ -1.12
CLSPN-203ENST00000373220 PPP6R1Q9UPN7 881 aa8.06□□□□□ -1.12
CLSPN-203ENST00000373220 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
CLSPN-203ENST00000373220 PLCB2Q00722 1185 aa8□□□□□ -1.13
CLSPN-203ENST00000373220 NPM3O75607 178 aaKnown RBP7.99□□□□□ -1.13
CLSPN-203ENST00000373220 MROH2BQ7Z745 1585 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 PPP4R3CPQ6ZMV5 832 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 WIZO95785 1651 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 RANGAP1P46060 587 aaPredicted RBP7.96□□□□□ -1.13
CLSPN-203ENST00000373220 HRCP23327 699 aa7.95□□□□□ -1.14
CLSPN-203ENST00000373220 PEG3Q9GZU2 1588 aa7.95□□□□□ -1.14
CLSPN-203ENST00000373220 BICRAQ9NZM4 1560 aa7.93□□□□□ -1.14
CLSPN-203ENST00000373220 SMARCA4P51532 1647 aa7.92□□□□□ -1.14
CLSPN-203ENST00000373220 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
CLSPN-203ENST00000373220 ARXQ96QS3 562 aa7.92□□□□□ -1.14
CLSPN-203ENST00000373220 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
CLSPN-203ENST00000373220 FAM9AQ8IZU1 332 aaPredicted RBP7.88□□□□□ -1.15
CLSPN-203ENST00000373220 SMARCA2P51531 1590 aa7.87□□□□□ -1.15
CLSPN-203ENST00000373220 ILDR1Q86SU0 546 aaPredicted RBP7.86□□□□□ -1.15
CLSPN-203ENST00000373220 HOMEZQ8IX15 550 aa7.85□□□□□ -1.15
CLSPN-203ENST00000373220 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
CLSPN-203ENST00000373220 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
CLSPN-203ENST00000373220 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
CLSPN-203ENST00000373220 WRNQ14191 1432 aaPredicted RBP eCLIP7.77□□□□□ -1.17
CLSPN-203ENST00000373220 CYB5RLQ6IPT4 315 aa7.77□□□□□ -1.17
CLSPN-203ENST00000373220 PDS5BQ9NTI5 1447 aa7.76□□□□□ -1.17
CLSPN-203ENST00000373220 C14orf37Q86TY3 774 aa7.75□□□□□ -1.17
CLSPN-203ENST00000373220 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
CLSPN-203ENST00000373220 CCDC88BA6NC98 1476 aa7.74□□□□□ -1.17
CLSPN-203ENST00000373220 TRIM26Q12899 539 aaPredicted RBP7.73□□□□□ -1.17
CLSPN-203ENST00000373220 FBLN2P98095 1184 aa7.72□□□□□ -1.17
CLSPN-203ENST00000373220 KIF21BO75037 1637 aa7.72□□□□□ -1.17
CLSPN-203ENST00000373220 PRDM2Q13029 1718 aa7.71□□□□□ -1.18
CLSPN-203ENST00000373220 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
CLSPN-203ENST00000373220 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
CLSPN-203ENST00000373220 EEA1Q15075 1411 aa7.7□□□□□ -1.18
CLSPN-203ENST00000373220 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
CLSPN-203ENST00000373220 ABCC8Q09428 1581 aa7.68□□□□□ -1.18
CLSPN-203ENST00000373220 KDM2AQ9Y2K7 1162 aa7.65□□□□□ -1.18
CLSPN-203ENST00000373220 VSIG10Q8N0Z9 540 aa7.65□□□□□ -1.18
CLSPN-203ENST00000373220 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
CLSPN-203ENST00000373220 PPARGC1BQ86YN6 1023 aaKnown RBP7.64□□□□□ -1.19
CLSPN-203ENST00000373220 TOP2BQ02880 1626 aa7.63□□□□□ -1.19
CLSPN-203ENST00000373220 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
CLSPN-203ENST00000373220 HMGXB3Q12766 1538 aa7.62□□□□□ -1.19
CLSPN-203ENST00000373220 TNIKQ9UKE5 1360 aa7.61□□□□□ -1.19
CLSPN-203ENST00000373220 NCAPD3P42695 1498 aa7.61□□□□□ -1.19
CLSPN-203ENST00000373220 PAXIP1Q6ZW49 1069 aaPredicted RBP7.61□□□□□ -1.19
CLSPN-203ENST00000373220 BAZ1BQ9UIG0 1483 aaKnown RBP7.61□□□□□ -1.19
CLSPN-203ENST00000373220 ZEB1P37275 1124 aaPredicted RBP7.6□□□□□ -1.19
CLSPN-203ENST00000373220 ATAD2BQ9ULI0 1458 aa7.6□□□□□ -1.19
CLSPN-203ENST00000373220 NBR1Q14596 966 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms