Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.14□□□□□ -1.11
NUBP1P53384 RPS17P13-201ENST00000448974 407 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 RN7SL58P-201ENST00000473445 294 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC8.14□□□□□ -1.11
NUBP1P53384 AC100870.1-201ENST00000522035 505 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.14□□□□□ -1.11
NUBP1P53384 AC006116.6-201ENST00000593258 1103 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 AC036176.3-201ENST00000602456 418 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 AC008962.1-201ENST00000605729 304 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 MIR376A1-201ENST00000616574 68 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC8.14□□□□□ -1.11
NUBP1P53384 AL355480.1-201ENST00000629041 99 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 TEX41-280ENST00000629185 591 ntTSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 MAPK10-333ENST00000641607 2481 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
NUBP1P53384 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
NUBP1P53384 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC8.14□□□□□ -1.11
NUBP1P53384 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 TARS2P1-201ENST00000506124 2041 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 OR2A20P-201ENST00000479887 2913 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 RBPJP6-201ENST00000411556 1431 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 ADCY10P1-202ENST00000457653 3785 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 Y_RNA.8-201ENST00000362353 102 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 AL139039.1-201ENST00000401900 692 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AL353151.1-201ENST00000402406 604 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 AC234779.1-201ENST00000425910 285 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 AC007547.2-201ENST00000468802 360 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 AC016559.1-201ENST00000511420 199 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AC091144.1-201ENST00000519573 138 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AC090151.1-201ENST00000520784 730 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.13□□□□□ -1.11
NUBP1P53384 AC004024.1-201ENST00000549244 247 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AL359219.2-201ENST00000555184 348 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 FKBP1AP4-201ENST00000631775 336 ntBASIC8.13□□□□□ -1.11
NUBP1P53384 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.13□□□□□ -1.11
NUBP1P53384 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NUBP1P53384 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NUBP1P53384 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 USP45-204ENST00000369233 2514 ntTSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.12□□□□□ -1.11
NUBP1P53384 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 AC107398.3-201ENST00000562284 7000 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 GLDCP1-201ENST00000510885 2678 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.12□□□□□ -1.11
NUBP1P53384 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms