Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TRBVB-201ENST00000477100 408 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SL101P-201ENST00000496350 279 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC114964.1-201ENST00000502306 1111 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC083829.1-201ENST00000503756 657 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-798P-201ENST00000516912 103 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC009248.1-201ENST00000548155 735 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC079600.1-201ENST00000550326 297 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 COX5AP2-201ENST00000554418 394 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC068446.3-201ENST00000555285 382 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL049839.1-201ENST00000556151 657 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL133153.1-201ENST00000557756 303 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC090287.1-201ENST00000578374 291 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SL220P-201ENST00000581978 300 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 MIR3133-201ENST00000583157 78 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC012433.1-201ENST00000588916 398 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 SNX29P2-204ENST00000603801 875 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL138889.2-201ENST00000603883 242 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 RAC1P9-201ENST00000604990 392 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 SRGAP2D-201ENST00000605551 1021 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SKP290-201ENST00000606842 195 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC023813.4-201ENST00000607580 580 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC131159.2-201ENST00000613236 702 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 pRNA.12-201ENST00000614353 90 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 pRNA.3-201ENST00000615048 90 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL139351.1-201ENST00000622092 320 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 KDM5DP1-201ENST00000622542 298 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC130454.1-201ENST00000622948 401 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL109806.1-201ENST00000623967 1248 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AC087645.3-201ENST00000624708 587 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL136313.1-201ENST00000624804 202 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 CR392039.4-201ENST00000624968 501 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 Z95327.2-201ENST00000414579 1873 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 SMG1P1-202ENST00000309865 4223 ntBASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 HLF-210ENST00000575345 3589 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP3-1Q9BYR8 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 MITF-203ENST00000328528 4680 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms