Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL450023.2-201ENST00000453276 545 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL825P-201ENST00000471327 295 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC084878.1-201ENST00000480555 648 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 OR6W1P-201ENST00000490285 1098 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL668P-201ENST00000493933 303 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AL672043.1-201ENST00000506599 395 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 MRPL27-204ENST00000507088 732 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 FTH1-203ENST00000529191 530 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 EHF-209ENST00000531728 485 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AP000866.4-201ENST00000533974 448 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 SPON1-AS1-201ENST00000534587 240 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC091044.1-201ENST00000591362 375 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC006115.3-201ENST00000594400 560 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AL162713.1-201ENST00000604480 262 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AP003392.6-201ENST00000607709 325 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 Metazoa_SRP.154-201ENST00000615469 268 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00598-216ENST00000638163 528 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 RGS22-218ENST00000617334 4253 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 MOGAT2-203ENST00000526712 3204 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 IMPDH1P3-201ENST00000399037 1549 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 RBBP8-204ENST00000399722 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC016251.2-201ENST00000623393 3089 ntBASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 NPIPB5-202ENST00000357370 1342 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 NPIPB12-201ENST00000458643 1342 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 NPIPB13-202ENST00000543463 1342 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 SIDT2-202ENST00000324225 4406 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 HMGCLL1-205ENST00000398661 2532 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP3-3Q9BYR6 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 FBXO18-202ENST00000379999 3702 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 AP3B2-215ENST00000620652 3729 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 AC018647.2-201ENST00000605778 4200 ntBASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 AHI1-202ENST00000327035 3638 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 VPS18-201ENST00000220509 3895 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 SLC16A14-201ENST00000295190 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 TNPO1P2-201ENST00000426249 2665 ntBASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 NOD2-201ENST00000300589 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KRTAP3-3Q9BYR6 PRM3-201ENST00000327157 424 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 RNU6-690P-201ENST00000365242 106 ntBASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 MIR181D-201ENST00000384853 137 ntBASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 MIR514A1-201ENST00000385133 98 ntBASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 RN7SKP156-201ENST00000410308 342 ntBASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 CTF2P-201ENST00000412003 604 ntBASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP3-3Q9BYR6 AC079987.1-201ENST00000420181 123 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms