Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 XRCC6P2-201ENST00000457831 1822 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 SAMMSON-203ENST00000641005 2168 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 MIR135B-201ENST00000362189 97 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 RNY4P16-201ENST00000364768 94 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 RNU6-702P-201ENST00000364982 107 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 RNU4-66P-201ENST00000365199 138 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 Y_RNA.414-201ENST00000384011 101 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 HMGB3P22-202ENST00000451823 572 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 OR9A3P-202ENST00000485185 878 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC098591.2-201ENST00000510152 315 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC026801.2-201ENST00000515352 425 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 HAUS8P1-201ENST00000549005 542 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 MIR3146-201ENST00000580367 79 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 MIR5690-201ENST00000583739 73 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 TRIM51GP-201ENST00000534741 1350 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 COL6A4P1-202ENST00000487147 4317 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 KPNA2P2-201ENST00000419546 1489 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 AC012618.3-205ENST00000637896 1496 ntBASIC7.54□□□□□ -1.2
PHOX2BQ99453 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.54□□□□□ -1.2
PHOX2BQ99453 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHOX2BQ99453 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.53□□□□□ -1.2
PHOX2BQ99453 TMCC1P1-201ENST00000518897 1980 ntBASIC7.53□□□□□ -1.2
PHOX2BQ99453 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.53□□□□□ -1.2
PHOX2BQ99453 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PHOX2BQ99453 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PHOX2BQ99453 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PHOX2BQ99453 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PHOX2BQ99453 AL359396.1-201ENST00000623151 2376 ntBASIC7.53□□□□□ -1.2
PHOX2BQ99453 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHOX2BQ99453 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms