RNA–Protein interactions for RNA: ENST00000442550.1

LINC00113-203, long intergenic non-protein coding RNA 113, humanhuman

TSL 3 BASIC

Gene LINC00113, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00113-203ENST00000442550 AEBP2Q6ZN18 517 aaPredicted RBP22.23■■□□□ 1.15
LINC00113-203ENST00000442550 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
LINC00113-203ENST00000442550 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
LINC00113-203ENST00000442550 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
LINC00113-203ENST00000442550 FOXD1Q16676 465 aa17.87■□□□□ 0.45
LINC00113-203ENST00000442550 POTEDQ86YR6 584 aa17.8■□□□□ 0.44
LINC00113-203ENST00000442550 MSH5O43196 834 aa16.98■□□□□ 0.31
LINC00113-203ENST00000442550 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
LINC00113-203ENST00000442550 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
LINC00113-203ENST00000442550 ADRA2BP18089 450 aa16.07■□□□□ 0.16
LINC00113-203ENST00000442550 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
LINC00113-203ENST00000442550 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
LINC00113-203ENST00000442550 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
LINC00113-203ENST00000442550 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
LINC00113-203ENST00000442550 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
LINC00113-203ENST00000442550 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
LINC00113-203ENST00000442550 RNF39Q9H2S5 420 aa14.43□□□□□ -0.1
LINC00113-203ENST00000442550 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
LINC00113-203ENST00000442550 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
LINC00113-203ENST00000442550 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
LINC00113-203ENST00000442550 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
LINC00113-203ENST00000442550 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
LINC00113-203ENST00000442550 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.2
LINC00113-203ENST00000442550 POTEHQ6S545 545 aa13.81□□□□□ -0.2
LINC00113-203ENST00000442550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC00113-203ENST00000442550 DSG3P32926 999 aa13.28□□□□□ -0.28
LINC00113-203ENST00000442550 CAPN15O75808 1086 aa13.19□□□□□ -0.3
LINC00113-203ENST00000442550 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
LINC00113-203ENST00000442550 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
LINC00113-203ENST00000442550 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
LINC00113-203ENST00000442550 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
LINC00113-203ENST00000442550 ABCB7O75027 752 aa12.82□□□□□ -0.36
LINC00113-203ENST00000442550 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
LINC00113-203ENST00000442550 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
LINC00113-203ENST00000442550 APLP2Q06481 763 aa12.7□□□□□ -0.38
LINC00113-203ENST00000442550 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
LINC00113-203ENST00000442550 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
LINC00113-203ENST00000442550 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
LINC00113-203ENST00000442550 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
LINC00113-203ENST00000442550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.41
LINC00113-203ENST00000442550 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
LINC00113-203ENST00000442550 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
LINC00113-203ENST00000442550 POLA2Q14181 598 aa12.31□□□□□ -0.44
LINC00113-203ENST00000442550 PIP4P2Q8N4L2 257 aa12.24□□□□□ -0.45
LINC00113-203ENST00000442550 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
LINC00113-203ENST00000442550 HAX1O00165 279 aa12.23□□□□□ -0.45
LINC00113-203ENST00000442550 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
LINC00113-203ENST00000442550 KCNA4P22459 653 aa12.09□□□□□ -0.47
LINC00113-203ENST00000442550 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00113-203ENST00000442550 EVX2Q03828 476 aa12.02□□□□□ -0.49
LINC00113-203ENST00000442550 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
LINC00113-203ENST00000442550 PITPNM1O00562 1244 aa12□□□□□ -0.49
LINC00113-203ENST00000442550 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
LINC00113-203ENST00000442550 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
LINC00113-203ENST00000442550 LHX8Q68G74 356 aa11.83□□□□□ -0.52
LINC00113-203ENST00000442550 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
LINC00113-203ENST00000442550 GABBR2O75899 941 aa11.71□□□□□ -0.53
LINC00113-203ENST00000442550 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
LINC00113-203ENST00000442550 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
LINC00113-203ENST00000442550 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
LINC00113-203ENST00000442550 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
LINC00113-203ENST00000442550 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
LINC00113-203ENST00000442550 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
LINC00113-203ENST00000442550 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
LINC00113-203ENST00000442550 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
LINC00113-203ENST00000442550 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
LINC00113-203ENST00000442550 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
LINC00113-203ENST00000442550 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
LINC00113-203ENST00000442550 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
LINC00113-203ENST00000442550 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
LINC00113-203ENST00000442550 FBLN2P98095 1184 aa11.39□□□□□ -0.59
LINC00113-203ENST00000442550 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
LINC00113-203ENST00000442550 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
LINC00113-203ENST00000442550 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
LINC00113-203ENST00000442550 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
LINC00113-203ENST00000442550 CLCN6P51797 869 aa11.27□□□□□ -0.61
LINC00113-203ENST00000442550 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
LINC00113-203ENST00000442550 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
LINC00113-203ENST00000442550 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
LINC00113-203ENST00000442550 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
LINC00113-203ENST00000442550 POTEMA6NI47 508 aa11.17□□□□□ -0.62
LINC00113-203ENST00000442550 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
LINC00113-203ENST00000442550 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
LINC00113-203ENST00000442550 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00113-203ENST00000442550 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
LINC00113-203ENST00000442550 ZBTB22O15209 634 aa11.1□□□□□ -0.63
LINC00113-203ENST00000442550 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
LINC00113-203ENST00000442550 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
LINC00113-203ENST00000442550 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
LINC00113-203ENST00000442550 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
LINC00113-203ENST00000442550 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
LINC00113-203ENST00000442550 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
LINC00113-203ENST00000442550 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
LINC00113-203ENST00000442550 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
LINC00113-203ENST00000442550 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
LINC00113-203ENST00000442550 POTEJP0CG39 1038 aa10.78□□□□□ -0.68
LINC00113-203ENST00000442550 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
LINC00113-203ENST00000442550 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
LINC00113-203ENST00000442550 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
LINC00113-203ENST00000442550 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms