Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNA5SP479-201ENST00000364858 117 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA1P02708 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHRNA1P02708 ARL4AP5-201ENST00000404372 599 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 CASKP1-201ENST00000412870 582 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 RPL7AP25-201ENST00000423357 805 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 AC004975.1-201ENST00000428733 208 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 CBX1P1-201ENST00000440184 427 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 NPM1P39-201ENST00000449818 867 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA1P02708 OR7L1P-201ENST00000456181 380 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 AC104763.1-201ENST00000475274 360 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA1P02708 RN7SKP34-201ENST00000516142 244 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 RN7SKP21-201ENST00000516503 220 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 AC105031.1-201ENST00000518550 476 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA1P02708 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA1P02708 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA1P02708 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA1P02708 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA1P02708 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA1P02708 AC012409.3-201ENST00000611343 981 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 BX005214.3-202ENST00000619809 325 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA1P02708 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA1P02708 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA1P02708 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CHRNA1P02708 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHRNA1P02708 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 AC007064.3-201ENST00000422608 359 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 GTF2IP2-201ENST00000424290 697 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA1P02708 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AL138787.1-202ENST00000437804 898 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA1P02708 NPM1P33-201ENST00000438918 872 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 SEPT14P1-201ENST00000458703 648 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 SCARNA10-201ENST00000459255 330 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA1P02708 NPM1P29-201ENST00000483112 803 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AC006349.1-201ENST00000555526 235 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AL049874.4-201ENST00000557593 255 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA1P02708 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AC023575.1-201ENST00000580510 358 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 MIR3936-201ENST00000584304 110 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AL035461.2-201ENST00000619201 524 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AP005019.3-201ENST00000620418 560 ntBASIC5.1□□□□□ -1.59
CHRNA1P02708 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA1P02708 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA1P02708 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA1P02708 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA1P02708 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CHRNA1P02708 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA1P02708 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CHRNA1P02708 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA1P02708 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA1P02708 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA1P02708 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 SNORA71.2-201ENST00000364941 134 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 VN1R37P-201ENST00000419096 748 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 RGS17P1-201ENST00000423358 553 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA1P02708 NDUFA5P1-201ENST00000433858 341 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 FTH1P16-201ENST00000435241 552 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 TMX2P1-201ENST00000436507 708 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.09□□□□□ -1.59
CHRNA1P02708 FHP1-201ENST00000442741 703 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 AC090142.1-201ENST00000465776 462 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CHRNA1P02708 RPL21P126-201ENST00000470049 478 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 AC109327.1-201ENST00000471666 403 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.09□□□□□ -1.59
CHRNA1P02708 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms