RNA–Protein interactions for RNA: ENST00000440184.1

CBX1P1-201, Transcript of chromobox 1 pseudogene 1, humanhuman

BASIC

Gene CBX1P1, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P1-201ENST00000440184 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
CBX1P1-201ENST00000440184 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
CBX1P1-201ENST00000440184 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
CBX1P1-201ENST00000440184 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
CBX1P1-201ENST00000440184 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
CBX1P1-201ENST00000440184 FOXD1Q16676 465 aa15.26■□□□□ 0.03
CBX1P1-201ENST00000440184 PPP6R1Q9UPN7 881 aa14.72□□□□□ -0.05
CBX1P1-201ENST00000440184 ADRA2BP18089 450 aa14.68□□□□□ -0.06
CBX1P1-201ENST00000440184 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
CBX1P1-201ENST00000440184 MSH5O43196 834 aa14.01□□□□□ -0.17
CBX1P1-201ENST00000440184 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
CBX1P1-201ENST00000440184 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
CBX1P1-201ENST00000440184 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
CBX1P1-201ENST00000440184 KCNA4P22459 653 aa13.28□□□□□ -0.28
CBX1P1-201ENST00000440184 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
CBX1P1-201ENST00000440184 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
CBX1P1-201ENST00000440184 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
CBX1P1-201ENST00000440184 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
CBX1P1-201ENST00000440184 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
CBX1P1-201ENST00000440184 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
CBX1P1-201ENST00000440184 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
CBX1P1-201ENST00000440184 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
CBX1P1-201ENST00000440184 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
CBX1P1-201ENST00000440184 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
CBX1P1-201ENST00000440184 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
CBX1P1-201ENST00000440184 ZBTB22O15209 634 aa12.27□□□□□ -0.45
CBX1P1-201ENST00000440184 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
CBX1P1-201ENST00000440184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
CBX1P1-201ENST00000440184 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
CBX1P1-201ENST00000440184 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
CBX1P1-201ENST00000440184 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
CBX1P1-201ENST00000440184 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
CBX1P1-201ENST00000440184 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
CBX1P1-201ENST00000440184 C1QBPQ07021 282 aaKnown RBP11.86□□□□□ -0.51
CBX1P1-201ENST00000440184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
CBX1P1-201ENST00000440184 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
CBX1P1-201ENST00000440184 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
CBX1P1-201ENST00000440184 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
CBX1P1-201ENST00000440184 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
CBX1P1-201ENST00000440184 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
CBX1P1-201ENST00000440184 APLP2Q06481 763 aa11.68□□□□□ -0.54
CBX1P1-201ENST00000440184 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
CBX1P1-201ENST00000440184 CAPN15O75808 1086 aa11.61□□□□□ -0.55
CBX1P1-201ENST00000440184 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
CBX1P1-201ENST00000440184 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
CBX1P1-201ENST00000440184 DSG3P32926 999 aa11.47□□□□□ -0.57
CBX1P1-201ENST00000440184 ABCB7O75027 752 aa11.43□□□□□ -0.58
CBX1P1-201ENST00000440184 POLA2Q14181 598 aa11.4□□□□□ -0.58
CBX1P1-201ENST00000440184 NISCHQ9Y2I1 1504 aa11.25□□□□□ -0.61
CBX1P1-201ENST00000440184 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
CBX1P1-201ENST00000440184 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
CBX1P1-201ENST00000440184 FBLN2P98095 1184 aa11.14□□□□□ -0.63
CBX1P1-201ENST00000440184 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
CBX1P1-201ENST00000440184 FKBP8Q14318 412 aa10.96□□□□□ -0.65
CBX1P1-201ENST00000440184 SPDYE4A6NLX3 237 aa10.93□□□□□ -0.66
CBX1P1-201ENST00000440184 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
CBX1P1-201ENST00000440184 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
CBX1P1-201ENST00000440184 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
CBX1P1-201ENST00000440184 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
CBX1P1-201ENST00000440184 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
CBX1P1-201ENST00000440184 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
CBX1P1-201ENST00000440184 PROM2Q8N271 834 aa10.82□□□□□ -0.68
CBX1P1-201ENST00000440184 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
CBX1P1-201ENST00000440184 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
CBX1P1-201ENST00000440184 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
CBX1P1-201ENST00000440184 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
CBX1P1-201ENST00000440184 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
CBX1P1-201ENST00000440184 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
CBX1P1-201ENST00000440184 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
CBX1P1-201ENST00000440184 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
CBX1P1-201ENST00000440184 CHRDL2Q6WN34 429 aa10.44□□□□□ -0.74
CBX1P1-201ENST00000440184 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
CBX1P1-201ENST00000440184 PRR29P0C7W0 189 aa10.41□□□□□ -0.74
CBX1P1-201ENST00000440184 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
CBX1P1-201ENST00000440184 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
CBX1P1-201ENST00000440184 ABCC9O60706 1549 aa10.35□□□□□ -0.75
CBX1P1-201ENST00000440184 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
CBX1P1-201ENST00000440184 MIER1Q8N108 512 aa10.32□□□□□ -0.76
CBX1P1-201ENST00000440184 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
CBX1P1-201ENST00000440184 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
CBX1P1-201ENST00000440184 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
CBX1P1-201ENST00000440184 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
CBX1P1-201ENST00000440184 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
CBX1P1-201ENST00000440184 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
CBX1P1-201ENST00000440184 FARP1Q9Y4F1 1045 aaPredicted RBP10.19□□□□□ -0.78
CBX1P1-201ENST00000440184 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
CBX1P1-201ENST00000440184 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
CBX1P1-201ENST00000440184 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
CBX1P1-201ENST00000440184 NUBP1P53384 320 aa10.13□□□□□ -0.79
CBX1P1-201ENST00000440184 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
CBX1P1-201ENST00000440184 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
CBX1P1-201ENST00000440184 POTEHQ6S545 545 aa10.09□□□□□ -0.79
CBX1P1-201ENST00000440184 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
CBX1P1-201ENST00000440184 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
CBX1P1-201ENST00000440184 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
CBX1P1-201ENST00000440184 AMER1Q5JTC6 1135 aaPredicted RBP10□□□□□ -0.81
CBX1P1-201ENST00000440184 PKD2Q13563 968 aa9.99□□□□□ -0.81
CBX1P1-201ENST00000440184 CD44P16070 742 aaKnown RBP9.98□□□□□ -0.81
CBX1P1-201ENST00000440184 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
CBX1P1-201ENST00000440184 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms