Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 AL133373.2-201ENST00000623187 2828 ntBASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.64■□□□□ 0.58
AP4B1Q9Y6B7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 AC116050.2-201ENST00000612102 1779 ntBASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 AL512625.2-201ENST00000417533 625 ntBASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 RARRES2P4-201ENST00000514074 484 ntBASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 MIR2861-201ENST00000636310 90 ntBASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
AP4B1Q9Y6B7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 AC105036.2-201ENST00000569468 176 ntBASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
AP4B1Q9Y6B7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 AC016405.3-201ENST00000607710 860 ntBASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 AL109923.1-201ENST00000618799 583 ntBASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 AC138932.1-201ENST00000534164 6830 ntBASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4B1Q9Y6B7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 AC135050.7-201ENST00000624508 2218 ntBASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 DPP3P2-201ENST00000416030 1696 ntBASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms