Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA11Q9Y5H2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 ID1-201ENST00000376105 1233 ntBASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 SOX15-203ENST00000570788 1093 ntBASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA11Q9Y5H2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 AC008687.6-201ENST00000596318 630 ntBASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA11Q9Y5H2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 AC026471.1-201ENST00000564629 3026 ntBASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA11Q9Y5H2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA11Q9Y5H2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA11Q9Y5H2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHGA11Q9Y5H2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA11Q9Y5H2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
PCDHGA11Q9Y5H2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 UNC93B4-201ENST00000505679 747 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms