Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 AC018470.1-201ENST00000624790 3129 ntBASIC17.81■□□□□ 0.44
PCDHGB1Q9Y5G3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 AL356652.1-201ENST00000615962 565 ntBASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB1Q9Y5G3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 WIZP1-201ENST00000531444 2299 ntBASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 AC093525.10-201ENST00000625130 1569 ntBASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 AC068880.1-201ENST00000507289 2297 ntBASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 AC087633.2-202ENST00000565166 1439 ntBASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 AP001271.2-201ENST00000624018 1556 ntBASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB1Q9Y5G3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 AC120498.9-201ENST00000339021 3867 ntBASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB1Q9Y5G3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms