Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB3Q9Y5G1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 AC026366.1-201ENST00000488803 879 ntBASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 AC138932.1-201ENST00000534164 6830 ntBASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB3Q9Y5G1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 AC005829.2-201ENST00000571422 1056 ntBASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB3Q9Y5G1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB3Q9Y5G1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms