Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.33■■□□□ 1
PCDHB2Q9Y5E7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 AFG3L1P-217ENST00000557444 2447 ntBASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.32■■□□□ 1
PCDHB2Q9Y5E7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 AL390955.1-201ENST00000428694 934 ntBASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 AC026271.3-201ENST00000571884 352 ntBASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHB2Q9Y5E7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 TMEM179-206ENST00000616017 1645 ntBASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 MESTP1-201ENST00000404287 994 ntBASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 FITM1-202ENST00000559294 800 ntBASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB2Q9Y5E7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 FSCN1P1-201ENST00000568912 1481 ntBASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 AC004980.1-204ENST00000429707 299 ntBASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 MIR6786-201ENST00000616843 113 ntBASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB2Q9Y5E7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 RCN1P1-201ENST00000400413 996 ntBASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 AC131212.4-201ENST00000623606 975 ntBASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms