Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LHX6Q9UPM6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 AC005786.4-201ENST00000623369 682 ntBASIC18.4■□□□□ 0.54
LHX6Q9UPM6 AP003400.6-201ENST00000624698 740 ntBASIC18.4■□□□□ 0.54
LHX6Q9UPM6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 AC092667.1-201ENST00000434301 2586 ntBASIC18.4■□□□□ 0.54
LHX6Q9UPM6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.4■□□□□ 0.54
LHX6Q9UPM6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
LHX6Q9UPM6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LHX6Q9UPM6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LHX6Q9UPM6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.39■□□□□ 0.54
LHX6Q9UPM6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 PRSS44-201ENST00000515154 1146 ntBASIC18.39■□□□□ 0.53
LHX6Q9UPM6 AC023632.3-201ENST00000521633 145 ntBASIC18.39■□□□□ 0.53
LHX6Q9UPM6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 AC010653.2-201ENST00000623505 997 ntBASIC18.39■□□□□ 0.53
LHX6Q9UPM6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LHX6Q9UPM6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 KRT18P38-201ENST00000449496 1282 ntBASIC18.38■□□□□ 0.53
LHX6Q9UPM6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 AL441883.1-201ENST00000566170 1045 ntBASIC18.38■□□□□ 0.53
LHX6Q9UPM6 LINC02084-201ENST00000606069 1096 ntBASIC18.38■□□□□ 0.53
LHX6Q9UPM6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 AL445675.2-201ENST00000620291 557 ntBASIC18.38■□□□□ 0.53
LHX6Q9UPM6 AL023973.1-201ENST00000624619 620 ntBASIC18.38■□□□□ 0.53
LHX6Q9UPM6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX6Q9UPM6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 AC092183.1-201ENST00000469884 875 ntBASIC18.37■□□□□ 0.53
LHX6Q9UPM6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 AC079776.4-201ENST00000511039 504 ntBASIC18.37■□□□□ 0.53
LHX6Q9UPM6 ZNF444P1-201ENST00000559497 298 ntBASIC18.37■□□□□ 0.53
LHX6Q9UPM6 AL512604.3-201ENST00000569583 964 ntBASIC18.37■□□□□ 0.53
LHX6Q9UPM6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 NPAP1P7-201ENST00000613027 823 ntBASIC18.37■□□□□ 0.53
LHX6Q9UPM6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LHX6Q9UPM6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms