Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 AP006587.1-201ENST00000534129 1502 ntBASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 AL135905.2-201ENST00000584934 1404 ntBASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 MIR4497-201ENST00000583208 89 ntBASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 HTR7P1-201ENST00000538670 1336 ntBASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GTF3C4Q9UKN8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 AL049637.2-201ENST00000641778 930 ntBASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF3C4Q9UKN8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF3C4Q9UKN8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 TSPY7P-201ENST00000431358 1114 ntBASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 AC093484.2-201ENST00000580996 2166 ntBASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF3C4Q9UKN8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms