Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 AC011484.1-201ENST00000377652 1995 ntBASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBQLN2Q9UHD9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN2Q9UHD9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 WIZP1-201ENST00000531444 2299 ntBASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 TSPY26P-201ENST00000476365 1326 ntBASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN2Q9UHD9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN2Q9UHD9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN2Q9UHD9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms