Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 AC142381.4-202ENST00000563973 229 ntBASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.25■□□□□ 0.83
PPARGC1AQ9UBK2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 AL020996.1-203ENST00000536896 2307 ntBASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PPARGC1AQ9UBK2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 KRT18P16-201ENST00000510337 1294 ntBASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 AC004264.1-201ENST00000608354 794 ntBASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPARGC1AQ9UBK2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 KRT16P5-201ENST00000455284 522 ntBASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.22■□□□□ 0.83
PPARGC1AQ9UBK2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms