Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 AC239809.2-201ENST00000415381 517 ntBASIC16.79■□□□□ 0.28
TREM2Q9NZC2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREM2Q9NZC2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 PRKY-204ENST00000533551 1019 ntBASIC16.78■□□□□ 0.28
TREM2Q9NZC2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 Z99916.2-201ENST00000604037 246 ntBASIC16.78■□□□□ 0.28
TREM2Q9NZC2 AL691432.2-201ENST00000607222 2038 ntBASIC16.78■□□□□ 0.28
TREM2Q9NZC2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TREM2Q9NZC2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.77■□□□□ 0.28
TREM2Q9NZC2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.77■□□□□ 0.27
TREM2Q9NZC2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TREM2Q9NZC2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.76■□□□□ 0.27
TREM2Q9NZC2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 AC124016.1-201ENST00000609552 612 ntBASIC16.76■□□□□ 0.27
TREM2Q9NZC2 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.76■□□□□ 0.27
TREM2Q9NZC2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TREM2Q9NZC2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms