Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AL390719.1-204ENST00000412397 1219 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AC098934.4-201ENST00000564127 592 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AL138781.1-201ENST00000566567 1274 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 MIR4758-201ENST00000577688 71 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AC006557.6-201ENST00000623071 864 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AC116351.2-201ENST00000606540 1585 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 AC124283.5-201ENST00000624661 1809 ntBASIC18.12■□□□□ 0.49
RLIMQ9NVW2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.12■□□□□ 0.49
RLIMQ9NVW2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 LINC01465-201ENST00000408887 1940 ntBASIC18.11■□□□□ 0.49
RLIMQ9NVW2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RLIMQ9NVW2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 MYC-209ENST00000641252 345 ntBASIC18.1■□□□□ 0.49
RLIMQ9NVW2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
RLIMQ9NVW2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 AC097658.1-201ENST00000475555 843 ntBASIC18.09■□□□□ 0.49
RLIMQ9NVW2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms