Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 KRT8P17-201ENST00000453110 1448 ntBASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 AC098934.4-201ENST00000564127 592 ntBASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 AC105036.2-201ENST00000569468 176 ntBASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 AC135050.7-201ENST00000624508 2218 ntBASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCM2LQ9NUG4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AL390961.4-201ENST00000623958 2535 ntBASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AC073210.2-201ENST00000430369 194 ntBASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AL161938.1-201ENST00000569833 2180 ntBASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 AC005332.8-201ENST00000622750 2735 ntBASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 KRT16P6-202ENST00000425692 1426 ntBASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCM2LQ9NUG4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AC006333.2-201ENST00000607957 2099 ntBASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 RNA5SP413-201ENST00000516373 109 ntBASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 KRT18P20-201ENST00000548986 1279 ntBASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AC087633.2-202ENST00000565166 1439 ntBASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCM2LQ9NUG4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCM2LQ9NUG4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms