Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 AL512625.2-201ENST00000417533 625 ntBASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 AC006015.1-201ENST00000429970 570 ntBASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 KRT18P5-201ENST00000436075 1291 ntBASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 AC087623.3-201ENST00000607047 1098 ntBASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 AC141586.3-201ENST00000562166 1838 ntBASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDC42SE2Q9NRR3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 KRT17P1-201ENST00000399211 1546 ntBASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 BID-214ENST00000617586 542 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE2Q9NRR3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 NEFHP1-201ENST00000412845 2629 ntBASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE2Q9NRR3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 HCG11-201ENST00000411553 5696 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms