Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AC090340.1-201ENST00000620778 4980 ntBASIC18.3■□□□□ 0.52
KLHL1Q9NR64 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.29■□□□□ 0.52
KLHL1Q9NR64 AL121829.2-201ENST00000620908 328 ntBASIC18.29■□□□□ 0.52
KLHL1Q9NR64 AL049637.2-201ENST00000641778 930 ntBASIC18.29■□□□□ 0.52
KLHL1Q9NR64 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KLHL1Q9NR64 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 AP001412.1-201ENST00000608405 714 ntBASIC18.28■□□□□ 0.52
KLHL1Q9NR64 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 AL135905.2-201ENST00000584934 1404 ntBASIC18.28■□□□□ 0.52
KLHL1Q9NR64 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KLHL1Q9NR64 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 AL121906.2-201ENST00000621597 723 ntBASIC18.27■□□□□ 0.52
KLHL1Q9NR64 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
KLHL1Q9NR64 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms