Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AC018553.1-201ENST00000616682 1458 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 AL138781.2-201ENST00000617896 1843 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 BX276092.2-201ENST00000417668 665 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 AL138781.1-201ENST00000566567 1274 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 MIR4758-201ENST00000577688 71 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 CROCCP3-202ENST00000420820 1947 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 KRT17P1-201ENST00000399211 1546 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 AL161938.1-201ENST00000569833 2180 ntBASIC17.56■□□□□ 0.4
HINT3Q9NQE9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HINT3Q9NQE9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 MIPEPP3-201ENST00000412105 444 ntBASIC17.55■□□□□ 0.4
HINT3Q9NQE9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.55■□□□□ 0.4
HINT3Q9NQE9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 AL049812.1-201ENST00000432563 2267 ntBASIC17.54■□□□□ 0.4
HINT3Q9NQE9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HINT3Q9NQE9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 AC116351.2-201ENST00000606540 1585 ntBASIC17.53■□□□□ 0.4
HINT3Q9NQE9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms