Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NLRC4Q9NPP4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
NLRC4Q9NPP4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NLRC4Q9NPP4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 AC092368.3-202ENST00000574180 1591 ntBASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 MYC-209ENST00000641252 345 ntBASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLRC4Q9NPP4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 AC097658.1-201ENST00000475555 843 ntBASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 AL138781.1-201ENST00000566567 1274 ntBASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.06■□□□□ 0.96
NLRC4Q9NPP4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 LINC01465-201ENST00000408887 1940 ntBASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.05■□□□□ 0.96
NLRC4Q9NPP4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 AC093503.3-201ENST00000624917 2352 ntBASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms