Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMMDC1Q9NPL8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMMDC1Q9NPL8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TIMMDC1Q9NPL8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TIMMDC1Q9NPL8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMMDC1Q9NPL8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMMDC1Q9NPL8 AC125437.2-201ENST00000625180 2167 ntBASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMMDC1Q9NPL8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AP000997.3-201ENST00000623333 2250 ntBASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AC006058.3-201ENST00000606217 1069 ntBASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AC121338.2-201ENST00000622535 1744 ntBASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMMDC1Q9NPL8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TIMMDC1Q9NPL8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
TIMMDC1Q9NPL8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TIMMDC1Q9NPL8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 PCDHB18P-201ENST00000524813 2368 ntBASIC18.63■□□□□ 0.57
TIMMDC1Q9NPL8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms