Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSU72Q9NP77 NOC2LP1-202ENST00000452600 2235 ntBASIC19.32■□□□□ 0.68
SSU72Q9NP77 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SSU72Q9NP77 TFP1-202ENST00000475455 1573 ntBASIC19.32■□□□□ 0.68
SSU72Q9NP77 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSU72Q9NP77 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSU72Q9NP77 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 IRX1P1-201ENST00000438849 1838 ntBASIC19.3■□□□□ 0.68
SSU72Q9NP77 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 NOC2LP2-201ENST00000407594 1944 ntBASIC19.3■□□□□ 0.68
SSU72Q9NP77 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.3■□□□□ 0.68
SSU72Q9NP77 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSU72Q9NP77 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 AC068338.2-201ENST00000563278 1430 ntBASIC19.29■□□□□ 0.68
SSU72Q9NP77 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 KRT18P11-201ENST00000435214 1283 ntBASIC19.29■□□□□ 0.68
SSU72Q9NP77 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSU72Q9NP77 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.29■□□□□ 0.68
SSU72Q9NP77 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms