Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 AC009237.14-201ENST00000609975 1594 ntBASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 PGM5P4-201ENST00000421970 445 ntBASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 KRT18P20-201ENST00000548986 1279 ntBASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 RBM17P2-201ENST00000616397 1405 ntBASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SND1-IT1Q9HBX3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SND1-IT1Q9HBX3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 CDV3P1-201ENST00000471403 739 ntBASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 AL031432.3-201ENST00000607698 485 ntBASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 AC110285.6-201ENST00000617652 491 ntBASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SND1-IT1Q9HBX3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms